Pistacia vera (pistachio): 116134429
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Entry
116134429 CDS
T07386
Name
(RefSeq) THO complex subunit 4B-like
KO
K12881
THO complex subunit 4
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03013
Nucleocytoplasmic transport
pvy03015
mRNA surveillance pathway
pvy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116134429
09122 Translation
03013 Nucleocytoplasmic transport
116134429
03015 mRNA surveillance pathway
116134429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116134429
03041 Spliceosome [BR:
pvy03041
]
116134429
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116134429
TREX complex
116134429
Spliceosome [BR:
pvy03041
]
Complex C
Other components
EJC/TREX
116134429
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116134429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
116134429
NCBI-ProteinID:
XP_031275966
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MTSALDMSLDDIIKSNKKSGGPNSRGRGGRGCGRGSGLGPARRSFKRGANRTAPYPKPGQ
APVTTWQHDMFTGAAQAKARAGATRASSIETGTKIYVSNLDYGVSNGDIKDLFSEVGDLK
RYAVHFDRSGRSKGTAEVVFSRRADALAAVKRYDNVQLDGKPMKLEIVGRNIAASAAAPP
STNGMYDNQNGGFRSRQRRGGAMGGPRRGGRGVSRGRGRGRGQSEKTPFSVEDLDADLEK
YHGSAKQSDAMVQ
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgccttggatatgtctctcgacgatattatcaagtccaacaaaaaatccggc
ggccccaattcccgaggcagaggcggccgcggctgcggccgcggctccggcctagggccg
gcgcgtcgctccttcaagcgtggcgccaatcggacggcgccgtatcccaagccgggtcaa
gctccggtcaccacgtggcaacacgacatgttcacgggcgctgcacaggcgaaggcaagg
gcgggggcaactcgagcttcgtccatagaaactggcactaaaatttatgtttccaatttg
gattatggagtttctaatggagacattaaggatctcttttccgaggttggtgatcttaag
cgatatgcagttcattttgaccgaagtggaagatcaaagggaaccgcagaagttgtcttt
tcacgacgagcagatgccttggcagccgtcaagagatacgacaatgtccaattagatgga
aaaccaatgaaacttgagattgtcggaagaaatattgctgcttctgctgctgcacctcca
tctacgaatggcatgtatgacaatcaaaatggtggttttagaagccgccaaagaagaggt
ggtgccatgggagggcctcgtcgtggtggacgtggagttagtagaggtcgtggccggggt
agaggtcaaagtgaaaagacgccattttctgtagaagatcttgatgctgatttggaaaag
taccatggttcagcaaagcaatcagatgcaatggttcagtga
DBGET
integrated database retrieval system