KEGG   Pistacia vera (pistachio): 116134429
Entry
116134429         CDS       T07386                                 
Name
(RefSeq) THO complex subunit 4B-like
  KO
K12881  THO complex subunit 4
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03013  Nucleocytoplasmic transport
pvy03015  mRNA surveillance pathway
pvy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116134429
  09122 Translation
   03013 Nucleocytoplasmic transport
    116134429
   03015 mRNA surveillance pathway
    116134429
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvy03019]
    116134429
   03041 Spliceosome [BR:pvy03041]
    116134429
Messenger RNA biogenesis [BR:pvy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     116134429
    TREX complex
     116134429
Spliceosome [BR:pvy03041]
 Complex C
  Other components
   EJC/TREX
    116134429
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    116134429
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 116134429
NCBI-ProteinID: XP_031275966
LinkDB
Position
Unknown
AA seq 253 aa
MTSALDMSLDDIIKSNKKSGGPNSRGRGGRGCGRGSGLGPARRSFKRGANRTAPYPKPGQ
APVTTWQHDMFTGAAQAKARAGATRASSIETGTKIYVSNLDYGVSNGDIKDLFSEVGDLK
RYAVHFDRSGRSKGTAEVVFSRRADALAAVKRYDNVQLDGKPMKLEIVGRNIAASAAAPP
STNGMYDNQNGGFRSRQRRGGAMGGPRRGGRGVSRGRGRGRGQSEKTPFSVEDLDADLEK
YHGSAKQSDAMVQ
NT seq 762 nt   +upstreamnt  +downstreamnt
atgacgagcgccttggatatgtctctcgacgatattatcaagtccaacaaaaaatccggc
ggccccaattcccgaggcagaggcggccgcggctgcggccgcggctccggcctagggccg
gcgcgtcgctccttcaagcgtggcgccaatcggacggcgccgtatcccaagccgggtcaa
gctccggtcaccacgtggcaacacgacatgttcacgggcgctgcacaggcgaaggcaagg
gcgggggcaactcgagcttcgtccatagaaactggcactaaaatttatgtttccaatttg
gattatggagtttctaatggagacattaaggatctcttttccgaggttggtgatcttaag
cgatatgcagttcattttgaccgaagtggaagatcaaagggaaccgcagaagttgtcttt
tcacgacgagcagatgccttggcagccgtcaagagatacgacaatgtccaattagatgga
aaaccaatgaaacttgagattgtcggaagaaatattgctgcttctgctgctgcacctcca
tctacgaatggcatgtatgacaatcaaaatggtggttttagaagccgccaaagaagaggt
ggtgccatgggagggcctcgtcgtggtggacgtggagttagtagaggtcgtggccggggt
agaggtcaaagtgaaaagacgccattttctgtagaagatcttgatgctgatttggaaaag
taccatggttcagcaaagcaatcagatgcaatggttcagtga

DBGET integrated database retrieval system