Pistacia vera (pistachio): 116134473
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Entry
116134473 CDS
T07386
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116134473
Spliceosome [BR:
pvy03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
116134473
Other components
Complex C specific factors
116134473
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
T2SSM
Motif
Other DBs
NCBI-GeneID:
116134473
NCBI-ProteinID:
XP_031276026
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MDDEQEMERFGMENDFEGGQWINGEFYFKRRKEKRTQTKDDVLYGVFASDSDSDDGYSKK
RRKDRDFGRKADLTKPVNFVSTGTVMPNQEIDKNLKEENDDILEEDDDNRPGLGIGFGSG
NSGAGLGSGLGFGGNSSKKKDAEVKACDLDGDDDSFLPTAFGRKIKEGAQRREREREREK
SEKKSQGGKGREIGTGDVGGFEKYTKGIGKKLLDKMGYKGGGLGKNEQGIVTPLEAKMRP
KNMGMGFNDFKEAPAAKLPDLEKLAEKKIVGQQQPVGRAKEKLWSKQTKGRKKEEYITME
ELLAKKQEQGFEVVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNIKLIVDL
AELDIQKIDNDLRNEKETALSLQKEKEKLQEMADEQKQQLDNMEKIVNVLGQIERENSLG
TLTLDSLANYFSDLLRRFPHDYKLCNLSCIACSYALPLFIRTFQGWDPLRNPSHKLEIVS
TWKNLLQTEDSHDLWDISTPYSQLVSEVVLPAVRISGINTWDARDPEPMLRFLESWEKLL
PSSVLQTMLDTIIFPKLSTAVDSWDPRRETVPIHVWVHPWLPMLGHKLEGLYHIIRIKLS
NVLDAWHPSDVSAYTILSPWKTVFDSTSWEQLMRRYIVPKLQVALQELQINPANQKLDQF
YWVMSWASAIPIHLMVDLMERFFFAKWLQVLYHWLNTSPNFEEIHKWYMGWKGLLPQELL
ANENIRTQLNLGLDMMSQAADGMKVVQPGLRENLSYLRVLEQRQFEAQQKAAAQAQQAAA
AAASHMDGTDAQREMTLKEVVEAYAQQHELLFKPKPGRTHNGQQIYGFGNISIYVDSLNQ
MVYAQKEEGWTAVTLDTLLRMHNNSIARRY
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgagcaggagatggagaggttcggaatggagaacgactttgagggaggccag
tggataaatggcgaattttatttcaagaggcgcaaggaaaaacgaactcaaaccaaagac
gatgttttgtatggcgtttttgcctctgattctgactctgatgatggttactccaagaag
cggagaaaagaccgtgactttggaagaaaagctgatttgacaaagcctgtcaatttcgtt
tctacaggtactgtaatgcccaatcaggagattgataagaatctcaaagaggaaaatgat
gatattttagaggaggatgatgacaaccgccctggtttaggtattggttttggatctgga
aattctggtgctggtttaggttcaggtttagggtttggtggaaatagttctaagaaaaag
gatgctgaggttaaagcttgtgatttggatggtgatgatgatagtttcttgccaacagca
tttgggaggaagataaaggagggagcacagaggagggagagagagcgggagagggaaaaa
tcggagaaaaagagtcaaggcggaaaagggagagaaattggcactggggatgtagggggt
tttgagaagtatacaaagggaattggtaagaagttgctggacaagatggggtataaaggt
ggtgggcttggaaagaatgagcaagggattgtgacaccgcttgaagcaaagatgagaccc
aagaatatgggtatgggtttcaatgattttaaagaagcaccagcagcaaagttgccagac
ttggaaaagttggcggaaaagaagattgtggggcagcaacaacctgttgggagagcaaag
gagaagctttggtcaaagcagacaaaggggaggaagaaggaagagtatattaccatggag
gaattgttagcaaagaaacaagaacaagggtttgaggtggttcagaaggtgattgatatg
cgagggccacaagttagggttttgacaaacttggagaatttggacgcagaggagaaagca
agggagaatgatgttccgatgcctgagctacagcataatataaagttgattgtggacttg
gctgagcttgatattcagaagattgataatgatttgaggaatgaaaaggagactgcattg
agtttgcaaaaggagaaggagaagttgcaggagatggccgatgaacagaagcagcagttg
gacaatatggagaaaattgttaatgttttgggtcaaattgagagagaaaattcattagga
actttaacattggactcacttgcaaactattttagtgacttgctcagaagatttcctcat
gattataaactctgtaacttgtcatgcattgcttgctcatacgctttgcctctttttata
aggacgtttcaaggttgggaccctcttcggaatccgtcacataaactggagattgtgtca
acatggaagaatttgttgcaaacagaggatagtcatgatttatgggatatatcaacacct
tattctcaactggtttcagaagttgtcttacctgctgtgagaatatctggcatcaatact
tgggatgcaagagaccctgagccaatgcttagatttttggagtcatgggagaagctgctg
ccttcttctgttcttcagaccatgttggatacaataatttttccaaaattgtcaaccgct
gtggactcatgggacccacgtcgagaaactgttccaatccatgtttgggtgcatccatgg
ctcccaatgttgggacataaattggagggtttgtatcatatcatacgtataaagttgagt
aatgttcttgacgcttggcatccaagcgatgtatctgcttacaccatattgtcgccgtgg
aagactgtgtttgattcaacaagttgggagcagctcatgcgtaggtatattgttccaaaa
ttgcaagttgctcttcaagagttacaaattaaccctgcaaaccaaaagcttgatcagttc
tattgggttatgtcttgggcttctgctattccaattcatctcatggttgatttgatggag
aggtttttctttgctaagtggctgcaggttttgtatcactggttgaacacttctccgaac
tttgaagagattcataaatggtatatgggatggaagggacttcttccacaggaacttcta
gctaatgaaaatatccggactcaactaaatctcggtcttgacatgatgtctcaagccgct
gatggtatgaaagtggtccaacctggcttaagggagaaccttagttatcttagggtgttg
gagcagaggcagtttgaggctcagcagaaagcagctgctcaagctcaacaagcagcagca
gctgctgcttcccatatggatggtacagatgcacaacgtgagatgacattgaaagaagtt
gtggaggcatatgcacagcagcatgaattgctatttaagcctaaacctggaaggacacat
aacggtcagcaaatatatggctttggcaacataagcatatatgtggactccctaaatcaa
atggtgtatgcgcaaaaggaggaaggatggactgcagttacacttgacacattgctgagg
atgcacaataattctattgcaaggagatattga
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