Pistacia vera (pistachio): 116134570
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Entry
116134570 CDS
T07386
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116134570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116134570
Spliceosome [BR:
pvy03041
]
Complex A
U1 snRNP components
U1 related factors
116134570
Complex B
116134570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
SMODS
Motif
Other DBs
NCBI-GeneID:
116134570
NCBI-ProteinID:
XP_031276108
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MAEMANNAQYSGVQMPHQPPIAGSMDPPRGFVPPMPLQFRPLVPAPQPQHFMPVASQQFQ
PVGQSVPVMNAGLPSQIPQPQFPPLMQQLPARPGPPAPSHLPPPPQAISLPNSQPGHITA
ASSLPQPNVQGPSLYPPGLGVLGRPLSASYTFAPSSYGQPQMTANASAGTQYQPQSQMHT
PSTPAGGQTGASGSQSSVSVAPLQQAREQPVVTAAPVLASTVQPKPTEGAPTDWIEHSSA
DGRRYYFNKRTRQSTWEKPFELMTPIERADASTDWKEFTSPDGRKYYYNKVTRQSKWSIP
EELKLAREQAEKLPIKGTMSEASANSQVLASIPSSVVQASSSVDTSSCSVQEVASSPVAV
APVVAVGDIQLATASGSLALAIVASPVLANEDGVQTTIDSIAPVTAASGSEGVSVPVNTI
VETMNNSSNSSAQDIVTSANEGPAQDKEETRNDVVTGEKVHDSLEEKTVEQEHLTYANKL
EAKNAFKALLESANVGSDWTWDQAMRVIINDKRYGALRTLGERKQAFNEFLGQRKKQEAE
ERRSKLKKAREDYKMMLEESLELTSSTRWSKAATMFENDERFKALERERDRRDLFDNHLE
ELKQKERVKAQEERKCNVIEYRKFLESCDFIKASSQWRKVQDRLEADERCSRLEKIDRLE
IFQEYLRDLEKEEEEQRKIQKEELRKAERKNRDEFRKLMEGHVADGTLTAKSHWRDYCMK
VKDLPAYIAVASNTSGSTPKDLFEDVAEELQKQYQEDKTRMKDAVRLKRITLLSTWSFED
FKASILEDVTSPPISDVNLKLVFDELLERVKEKEEKEAKKRKRLADEFFDLLRSIKEISV
SSTWENCLQLFESSREFSSIGEESICRGIFDEYVAQLKEQAKEIEGKRKEEKARKEKERE
ERDRRKVKHGREKERGREREKEDHLKKDGTDNEHVDSEIHFFSEKKSGKDNDKKHRKRHQ
SSQDNLNENEKDRSKNSHRHNSDRKKSRRHASTPESEDESRHKRHKRDHRSGSRKIGDHE
DLEDGEFGREGESR
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaatggccaataatgctcaatattctggtgtacagatgcctcatcaacctcca
atagctggttctatggatcctcctcgaggttttgttccacccatgccacttcagttccgg
cctttggttccagcaccgcagccacaacactttatgccagtggcttctcagcagtttcag
cctgttggacaaagtgttcctgtaatgaatgctggattgccatctcaaattccacagcct
cagtttccgccattgatgcaacagctaccagcaagacctggcccaccagcgcctagccat
cttccaccgccaccacaggcaatatcattgccaaattcacagccaggtcacatcacagct
gcatcatcactaccccagcctaatgtgcaaggtcccagtctctacccacctggtttgggt
gtcctgggaagacctctctctgcatcatatacttttgcaccatcttcatatggtcaacct
caaatgactgctaatgctagtgctgggactcagtatcagcctcagtctcaaatgcatact
ccaagtactcctgctggaggacaaacaggtgcatctggtagccagagcagtgtttctgtt
gcacctctgcagcaagctcgtgaacaacctgttgttaccgctgccccagtactggcatct
actgttcaacctaagcctactgaaggagccccaacagattggatagagcattcttctgct
gatgggagaagatattacttcaacaagaggacaagacaatctacttgggagaagcctttt
gaattgatgacacctattgagagggcagatgcatcaactgactggaaggaatttactagt
cctgatgggagaaagtattactataacaaagttaccaggcaatcaaaatggtcaatacca
gaagagttaaagttggcccgtgaacaagcagaaaagcttcccatcaaaggaacaatgtca
gaagcatctgctaattcccaagtactagcttctattccttcctctgtggttcaagcatca
tctagtgtcgatacctcttcttgctctgttcaagaggtagcatccagcccagtggctgtt
gcaccagttgttgctgttggtgacattcaacttgcgacagcatctggatcattggcatta
gccattgtagcttctcctgtcttagccaatgaagatggagttcagacgactatagattct
attgcaccagtaacagctgcttctgggagtgaaggagtttctgtacctgtcaatacaatt
gtggaaacaatgaataattccagcaactcgtcagctcaggatattgttacttctgcaaat
gaaggccctgcacaagataaagaagaaaccaggaatgatgtggtgacaggtgaaaaagtt
catgattcattggaagagaagacagttgagcaggagcacttaacttatgccaacaagctg
gaggctaagaatgcatttaaagcacttttggagtctgcaaatgttgggtctgactggact
tgggatcaggcaatgagagtaataattaacgacaaaagatatggtgcactaagaacactt
ggggagcgaaagcaagcttttaatgagttcttaggtcaaaggaaaaaacaggaagctgaa
gaaagacgaagtaagctgaaaaaagcacgggaagattataaaatgatgttggaagagtct
ctagagctgacatcatctacaagatggagcaaagcagcaaccatgtttgaaaatgatgag
cgtttcaaagctcttgagcgagaaagagatcgcagggatctgttcgataatcatttggag
gaactcaaacagaaggaacgagtaaaggcacaggaggagcgcaagtgtaatgtaatagag
tataggaaatttttggagtcatgtgacttcattaaggcaagcagccagtggcgaaaagtt
caagaccgcttagaggctgatgaaagatgttcacgtcttgagaaaattgatcgactggaa
atttttcaggaatatttacgtgatttagagaaggaagaggaggaacaaaggaaaatacaa
aaggaagaactgagaaaggctgagcgcaaaaatcgtgatgagtttcgcaagttgatggaa
ggccatgttgctgatggcactcttacagccaaatctcattggcgtgattattgcatgaag
gttaaagatttgcctgcatacatagcagtcgcatcaaatacctcaggctcaacaccaaag
gatttgtttgaagatgttgctgaagagttgcagaaacagtatcaagaggacaaaactaga
atgaaggatgcagtgaggttgaaaaggatcactttgttatcaacttggtcatttgaagat
ttcaaggcttctattttagaggatgttacctctcctcctatatcagatgtcaacttaaag
ctggtatttgacgagttgttggaaagagtcaaggagaaggaagagaaagaagctaagaaa
cgtaaacgtctagcagatgaattttttgatctcctacgttccatcaaggagatatctgta
tcttcaacatgggagaattgcttacaactttttgagagtagtcgagaattcagttcaatt
ggagaagagagcatttgcaggggaatttttgatgaatatgtagcacagctgaaagaacag
gccaaagaaattgaagggaaaagaaaggaagagaaggcaaggaaggagaaagaaagagaa
gaaagagataggaggaaagtgaagcatggaagggaaaaagagagaggacgggaaagagaa
aaagaggatcacttaaagaaggatggaacagacaatgaacatgttgattctgaaattcat
ttcttcagtgagaaaaaatcgggaaaagacaatgataagaaacaccggaagcggcatcaa
agttctcaggataacttgaatgaaaatgaaaaggatcgatctaagaactctcataggcat
aacagcgatcgcaaaaagtcaagacggcatgcatcgacacctgagtcagaagatgagagc
agacataaaagacataagagagaccaccgtagtggttcccgcaaaattggcgatcatgaa
gaccttgaggatggggaatttggtagggagggtgaaagtcggtag
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