KEGG   Pistacia vera (pistachio): 116134724
Entry
116134724         CDS       T07386                                 
Name
(RefSeq) autophagy-related protein 16
  KO
K17890  autophagy-related protein 16-1
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    116134724
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvy04131]
    116134724
   03029 Mitochondrial biogenesis [BR:pvy03029]
    116134724
Membrane trafficking [BR:pvy04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    116134724
 Others
  Specific organelles associated proteins
   Auto phagosome
    116134724
Mitochondrial biogenesis [BR:pvy03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    116134724
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WDR90_beta-prop_4th ATG16 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_WDR19_1st WDR54 Beta-prop_RIG_1st Cytochrom_D1 KNTC1_N PEP5_VPS11_N Beta-prop_Vps41 PQQ_2 RdRP Fez1
Other DBs
NCBI-GeneID: 116134724
NCBI-ProteinID: XP_031276243
LinkDB
Position
Unknown
AA seq 510 aa
MSQEEIAKEAITHALKALRKRHLVEEGAHAPAIIALSRPIISQGSEWKEKAENLETELQQ
CYKAQSRLSEQLVVEVAESRASKNLLQEKESQINSLQEELGKIRDECSQLKTDLEEKITA
LELVMAENKEIRAQLEKMTIKAKDAEAENKMLVDRLMLQKMQDAERLNEANALYEDLMER
HKASGLENLAKQQVDGVVRRSEEGAEDFMDSTVSSACKHKINAHNGGCASILFEYNSDRL
ISGGQDKSIKLWDTNTGSLSNTLYGCLGSVLDLSITHDNRSVIAASSSNNLYVWDVYSGR
VRHSLTGHADKVCAVDVSKISSRHVVSAAYDRTIKVWDLQKGYCVNTIIFHSNCNALAFS
MDGQTIFSGHVDGNLRLWDIQTGKLLSEVAAHAPAAVTSISLSRGGNVVLTSGRDNMHNL
FDIRSLEVCRSLRATGNRVASNWSRSCISPHENYVAAGSADGSVCIWSISKADIVNTLKE
HSAPVLCCSWSGLGKPLASADKNGIVCIWT
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcacaagaagaaattgcgaaggaagctataacgcacgctttgaaggcgctgcggaaa
cggcatttggttgaagaaggcgctcatgctcccgctattatcgctctttctcggcccata
atttctcaggggtcagaatggaaagagaaagctgaaaatctggaaacggaacttcagcaa
tgttacaaagcccaatctaggttgtcggagcaacttgtggttgaagtagccgagtccaga
gcttctaaaaatttgttacaagagaaagaatcacaaattaattctctacaggaggaattg
gggaaaataagggatgaatgttctcaattgaagacggatttggaagaaaagattacagct
ctagaattagttatggcggagaacaaggaaatccgagcacaactagaaaaaatgaccatt
aaagctaaggatgcagaggctgaaaataagatgttggttgatcgattgatgctgcaaaag
atgcaggatgctgaacggctaaacgaggcaaatgcgctttatgaagatttgatggaacgg
cacaaggccagtggactggagaatcttgcgaagcagcaagtagatggtgttgtccgccga
agtgaagaaggtgctgaggactttatggactcaactgtttcttctgcatgcaaacacaag
atcaatgcccacaacggtggctgtgcatccatattgtttgagtacaactctgacagattg
attagtgggggacaggacaagtcaatcaaactgtgggacacaaacactggatctctaagt
aataccctttatggttgcctcggctctgttcttgatctttctattacccatgataataga
tctgtcattgcagcaagtagctcgaacaacttatatgtatgggatgtctactctgggcgt
gttcgtcatagtctcactggtcatgcagataaagtgtgtgctgtagatgtgagtaaaatt
tcaagccgtcacgttgtgagtgcagcttatgatcgcacaataaaagtttgggatttgcag
aaaggttattgtgtcaacaccatcattttccacagcaactgcaatgctcttgcattcagc
atggatggacaaaccatattttctggtcatgttgacgggaatttgcgtttatgggatatt
cagacgggaaagctgcttagtgaagttgctgcacacgcacctgcagctgtcacatctatc
tctctgtctagaggaggaaacgtagtattgactagtggacgagacaacatgcacaattta
tttgatattcggtctctggaagtttgtcgctcattaagagcaactggaaatcgagtggca
tctaattggagcagatcctgcatcagtccacatgagaactatgttgctgctggctcagct
gatggatctgtatgtatctggtcgatatcgaaagctgatatagtcaacactctgaaggaa
cacagtgccccagttctgtgttgttcgtggagtggcctcgggaaacctctagcatccgct
gacaagaatggaattgtttgtatttggacatga

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