Pistacia vera (pistachio): 116134980
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Entry
116134980 CDS
T07386
Name
(RefSeq) elongation factor 1-alpha-like
KO
K14416
elongation factor 1 alpha-like protein
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116134980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116134980
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116134980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
116134980
NCBI-ProteinID:
XP_031276524
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MPRKINYGADDYDDGYDDYEDYDDHDYDYDVEGNGEAPESKQETSKSGIWRCSICTYDND
EGMPACDICGVLRTPLVKVSGNNSNTTGNLLDTKSSRVSSSFSEKNGAVDKLSAKKSDSA
KALVPKDKQDTMNNRKYSKNEVVQVSTRSSDSSSTVMSKDSHGSHSNDAVSICLSDAHDS
SGSSTNIAQLQSGPSNTKNSSLSLKSGSSSSVNARRKNSNTQYKPEKWMLPDNTGDRLTQ
LNLAIVGHVDSGKSTLSGRLLFLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDESTEER
ERGITMTVAVAYFDSKKYHVVVLDSPGHKDFVPNMISGATQSDAAILVIDASVGSFEVGM
DSTKGQTREHAQLIRSFGVDQLIVAVNKMDAVQYSKDRFESIKLQLGTFLRSCNFKDSSV
SWIPLSAIENQNLVAAPSDVQLSSWYQGPCLLDAIDSLQPPARDFSKPLIMPICDVVKLQ
HGHVCACGKLEAGALRSGMKVLVMPSGDIGTVHSLDRDSQACAVARAGDSVGVSLQGIDV
SHVMAGGVLCHPDFPVAISTHLELRVLVLDFAAPILIGSQLEFHIHHAKEVARIVKIVSL
LDTKTGKVTKKAPRCLTAKQSAVVEVALQGPVCVEEFSNCRALGRVFLRALGRTIAVGIV
TRIIEDQA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggaaaattaactacggagctgatgattacgatgacggctacgatgattatgaa
gattatgacgaccatgattacgactatgatgtggagggaaacggcgaagcacctgagtct
aagcaagaaacttccaagtctggaatttggcgctgctctatttgtacttatgataatgat
gagggcatgcctgcatgtgatatttgtggagttctccgtactcctctggttaaagtttca
ggcaacaatagtaacacaacaggcaatcttctagacacgaaatcttccagagtttcctcc
agtttctctgagaaaaatggtgcagttgataaattaagtgccaaaaaatctgatagtgcc
aaagcattagtgccaaaagacaagcaagataccatgaataatagaaaatattcgaaaaat
gaagtagtacaagtaagcactagaagttcagatagctcttctactgtaatgtcaaaagac
agtcatggcagtcattctaatgatgcagttagcatctgtttaagtgatgcacatgatagc
agtggttcttcaactaatatagctcaactacaaagtggtcccagtaatacaaagaactca
tcattgtctcttaaatctggaagctcatctagtgttaatgctagaagaaagaattcaaat
acacagtataagcctgaaaaatggatgcttcctgacaatacaggagatagattgactcaa
ctaaatcttgcaatagttggccatgttgattcgggaaaatcaacactctcaggtagactg
ctgtttcttctcggacgaatatctcaaaaagaaatgcacaaatatgaaaaagaagccaaa
ttacagggcaaaggatcctttgcttacgcttgggcattggacgagagcactgaagaaagg
gaacggggaattactatgactgtcgctgttgcatattttgattccaaaaaatatcatgtt
gttgtgcttgactcccctggccataaggattttgttccaaacatgatatctggagcaaca
caatctgatgctgcaattcttgtcatagatgcctcggtcggttcatttgaagttggtatg
gacagtacaaaagggcagacaagggagcatgcacaactcattagaagttttggtgttgat
caacttatagttgccgtcaacaagatggatgctgtgcaatattccaaagatcggtttgaa
tcaataaaactacaacttggaacatttcttcgttcttgtaattttaaggattcctccgtg
tcatggattccattgagtgccattgaaaatcaaaatttggtggcagctccttctgatgtt
cagctttcatcttggtatcaggggccctgtctgttggatgcaattgattctttacaacct
cctgctagagatttttcaaagcctctaattatgcccatatgtgatgttgttaaattacag
catgggcatgtgtgtgcctgtggtaaattggaggctggagctcttcgaagtggaatgaag
gtcttagtcatgccatctggagatataggcactgtgcattccctagatcgtgactctcag
gcttgtgccgttgcaagagctggagatagtgtaggtgtcagtcttcaaggtattgatgta
agccatgtgatggctggaggtgtgttatgccaccctgatttccctgtcgcaatttcaaca
catttggagctgagggtgcttgttttggattttgcagctcctattttaattggttctcag
ttggaatttcatatacaccatgcaaaggaggttgcaagaattgtaaagatagtgtcatta
cttgatacaaagaccggaaaagttacaaaaaaagcaccccgctgtcttactgcaaagcag
agtgcagtagttgaggtagctttgcaaggaccagtctgtgtggaggagttctcaaactgt
agagctctcggtagagtgtttctaagagctttaggaagaactattgctgtaggcattgta
acccgtataattgaggatcaagcctaa
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