KEGG   Pistacia vera (pistachio): 116136285
Entry
116136285         CDS       T07386                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03020  RNA polymerase
pvy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116136285
  09124 Replication and repair
   03420 Nucleotide excision repair
    116136285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvy03021]
    116136285
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116136285
Transcription machinery [BR:pvy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     116136285
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116136285
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 116136285
NCBI-ProteinID: XP_031277863
LinkDB
Position
Unknown
AA seq 138 aa
MSGEEEENAAELKIGEEFLKAKCLMNCEVSLILEHKFEQLQQTSDDPMNQVSQVFEKSLQ
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD
DEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtccggagaagaagaagagaatgcggccgagcttaaaatcggagaggaatttttgaag
gccaagtgtttgatgaattgtgaagtttcgttgattcttgagcacaagtttgagcagctt
cagcagacgtctgatgatcccatgaatcaagtttcccaggtttttgagaaatcattgcag
tatgtgaagcgcttcagtcggtataagaatcctgatgctgttagacaagttagagaaatc
ctgagtagatatcagttggctgaattcgagctgtgtgtgcttggcaacctttgccctgaa
actgtagaggaagctattgctatggtaccttccattaagaccaaggggcgggctcatgat
gacgaggcaatcgagaaaatgctgaatgacctatcactaatcaagaaatttgagtag

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