Pistacia vera (pistachio): 116136614
Help
Entry
116136614 CDS
T07386
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
116136614
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvy04040
]
116136614
Ion channels [BR:
pvy04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116136614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
116136614
NCBI-ProteinID:
XP_031278148
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MNNNISLYNLHKTFSLRRANASWWNRVHDPQSDFITKWNHFFLVICLVALYLDPLYLFYP
IIRNDCLTIDLNLGIVVTFFRTVTDAFFLSHIFIKFRTAFVAPSSRVFGRGELVKDPKKI
ASRYLKSEFAMDLAAALPLPQLVIWFVIPVLKYTTAEYANHTLSLIVLIQYVPRISIIFP
LNRRIIKTAGIVAKSPWSGSVYNLLMYMLMSHLLGAVWYLFSMQRQYECWSIECQKESNI
TNAQPCIASFLDCETKDKHKREAWFKATMVLRNCDAKDDDKFQFGIYADAFTNDVAESTF
FKKYFYCLWWGLKTLSCYGQNLETSTYVGETIFSIVVCIGGLILFSHLIGKMQTYLQSTN
ARLEEWRVRRKDTEEWMRHRQLPQELQERVRRFVQYKWLATRGADEESILGSLPLDLRRQ
IQRHLCLAFVQRVPFFAQMDPQLLDAICERLYSSLNTRDTFLIREGDPVSEMLFIIRGQV
ESSTTNGGRVGFYNSIVLRIGDFCGEELLTWALMPNSTLNLPLSTRTVRSITEVEAFALR
AEDLKFVAGQFKRLNSKKLQHAFRYYSHQWRAWGAYFIQIAWRRYLKRKEAMELAMEEGL
FEDEYYSDETPEESNEDSGSAAERTSSVEGSAVNATLTGRVLSGRVLSSRLSSTRRLSNR
FSDYDPDGSTLKMPKMFKPQDPDFSKDQSGKIPLSLIVTCGG
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaataataacataagcttgtacaatttgcacaagaccttctccctccgccgagccaac
gcgtcctggtggaaccgagtccacgacccacaaagcgactttatcacaaaatggaaccat
ttttttctggtgatttgccttgtagcgttgtatttagaccctctgtatcttttctacccc
attatccgcaacgattgcttgaccatcgatctcaatttaggcatcgtggttaccttcttt
aggacagtgacggacgcattctttctctcgcacatttttatcaagttcagaacagcattt
gtggcacccagttccagggtttttggcaggggagagctcgtcaaggatccaaaaaagatt
gccagccgctacttgaagtctgaatttgctatggatttagcagctgcacttcctctccca
cagcttgtcatctggttcgtaattccagtactcaaatatacaacagctgaatatgccaac
cacactctttctctcattgttctgattcaatatgttccccgaatttcaattatattccct
cttaacagacggattattaaaacggctggaattgtggccaaaagtccgtggtcaggctct
gtttacaatctcctcatgtacatgcttatgagccatcttcttggagctgtatggtatttg
ttttctatgcagcggcagtatgagtgctggtctatcgaatgtcaaaaggagagtaatatc
accaacgctcagccttgtattgcttcttttcttgactgtgaaactaaggacaaacataaa
cgcgaagcttggtttaaggccaccatggtgctccgcaattgtgatgctaaagatgatgat
aagtttcagttcggaatatacgctgatgcttttactaatgatgttgctgaatcaactttc
tttaaaaaatatttctattgcctctggtggggtttaaaaacgctaagttgctatgggcag
aatcttgagacgagtacttatgttggtgaaacaatattcagcattgttgtctgcattggt
ggtctaattctgttctcacatctcataggcaaaatgcagacgtatttgcaatccacaaac
gctagactagaggagtggagggttagaagaaaagatacagaagagtggatgaggcaccgg
caattgccccaagagctgcaagaacgggtacgccggtttgtgcaatacaaatggctagcc
acaagaggagctgatgaagaatccattttgggctctttacctttggatcttaggcgtcaa
attcagaggcatctctgtctagcttttgttcaacgtgttccattttttgcacaaatggat
ccgcagctcttagatgccatatgtgaacgtctctactcatccttgaataccagagacacc
ttccttattcgagaaggcgatccggtgagcgagatgctcttcatcattagaggtcaagta
gagagctccacaaccaatggaggaagggtaggattctacaattctattgttctcagaatt
ggtgacttctgtggtgaagaattattgacatgggccttgatgccaaactctacactcaat
cttccattatcaactagaacagtcaggtccattactgaagttgaggccttcgcacttcga
gctgaagaccttaagtttgttgcaggccaatttaagcgccttaatagcaagaaactccag
catgctttcagatactactctcaccagtggagggcttggggagcttactttatacaaatt
gcatggagacgctatttaaagagaaaggaggcgatggagttggctatggaggagggctta
tttgaagatgagtattacagtgatgaaactcctgaagaaagtaatgaagatagtggttct
gctgccgagaggacatcatcagtggagggtagtgcagtcaatgccactcttactggtaga
gtacttagtggtagagtactttcttctagattaagtagcacaagaaggcttagcaatagg
ttttcagattatgaccctgatggatctaccttaaaaatgcccaaaatgtttaagcctcag
gatcctgatttctctaaagaccaatctggtaaaattcctctgagcttgattgtcacttgt
ggtgggtag
DBGET
integrated database retrieval system
