Pistacia vera (pistachio): 116137675
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Entry
116137675 CDS
T07386
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
116137675
Enzymes [BR:
pvy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
116137675
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Motif
Pfam:
Rhamnogal_lyase
fn3_3
CBM-like
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
116137675
NCBI-ProteinID:
XP_031279208
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Position
Unknown
AA seq
568 aa
AA seq
DB search
MRRILQRIPRCSCCCGFATCSNYVSEGISHSLKPQAGTDSGKQVLQNNTCPSMPRVRLHI
QDRHVVLDNGILQVTLSKPGGIVTGIRYNGIDNLLEFRNKETNRGYWDLNWSAPGGKGIF
DVIEGTHFRVVVENEEQIELSFLRFWDSSLEGKYIPLNIDKRFIMLRGSSGFYSYAIYEH
LQEWPAFCLDQTRFTFKLRKEKFRYMAIADNRQRHMPLPEDRMTGKGQPLDYPEAVLLVN
PMDPELQGEVDDKYQYSCENKDLRVHGWICYAPPVGFWVITPSDEFRSGGPIKQNLSSHV
GPTSLAMFLSRHYAGKYMVTSVGPNEPWKKVFGPVFIYLNSAVSGDDPLWLWEDAKIKMM
GEVRSWPYSFPASEDFQKSEQRGSVCGRLLVLDRYVSKDYIPANGAYVGLAPPGDIGSWQ
TECKDYQFWTKSDEEGYFSIPHVRTGNYNLYAWVPGFIGDFRYDTAVTITSGNNIEMGDL
VYEPPRDGPTLWEIGIPDRSAAEFYIPDPYPMYLNKLFVNHPERFRQYGLWSRYTELYPN
EDLVYTIGVSDYRKDWFFAHIVSHYYYR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggattttgcagagaatccctcgttgttcctgttgttgtggctttgccacgtgt
agtaattatgtgagtgaaggtatctcccattctcttaaaccccaagcaggaactgacagt
ggcaaacaagttctgcaaaataatacatgcccctccatgcctcgggtccggttgcatatt
caagatcgtcatgtggtattggataatggcatactccaagtcacattatcaaaaccaggc
gggattgttaccggaatacgatataatggcattgacaatttgcttgaatttcgtaacaag
gagactaatagaggttactgggatcttaattggagtgcaccaggaggaaagggaatattc
gacgtgattgaaggaacacattttagggttgtagttgaaaatgaggaacaaattgaactc
tcattcttaaggttttgggattcctctcttgagggcaagtacattcccttaaatatagat
aaaaggttcataatgcttcgtggttcatcggggttttactcttatgcaatttacgagcac
ttacaggaatggcctgcattttgtcttgatcaaactcgattcactttcaagctcagaaaa
gagaagtttcgctatatggcaatagcagataacagacagagacatatgcctcttcctgag
gatcgaatgacgggaaaaggccaacccctggactacccagaagctgtcctacttgttaat
cccatggatcctgagctccaaggagaggtggacgacaagtaccaatattcatgtgagaat
aaagatctcagggttcatggatggatatgctatgctcccccagtagggttctgggtaatt
acacctagtgatgagttccgatctggtggaccaatcaaacagaatctttcgtcacatgta
gggcctacctcccttgctatgtttcttagcagacactatgctggaaaatacatggtcaca
agtgttggacccaatgaaccatggaagaaagtctttggtccagtttttatctatctcaat
tctgctgttagtggagatgacccactttggctgtgggaggatgctaaaataaagatgatg
ggtgaagtccgaagctggccatacagttttcctgcatccgaggattttcagaagtcagaa
caacggggaagtgtttgtggtagactactagtgctagacaggtatgtaagcaaagactac
ataccggcaaatggtgcttatgttgggctggcaccacctggagatataggttcatggcaa
acagaatgcaaggactaccaattctggaccaaatcagatgaggagggctatttctccata
ccacatgtacgtactggcaactataatctttatgcatgggtccctggttttattggagat
tttcgatatgatactgctgttaccataacctcaggcaacaatattgaaatgggcgatctg
gtatatgagcctccaagagatgggccgacattgtgggaaataggcatccctgatcgttct
gctgctgagttctatattcctgacccttatcctatgtatcttaataaactatttgtcaat
caccctgaaaggttcaggcagtatggtttatggagtagatacacagaattatatcctaat
gaagacttggtatacacaattggtgtcagtgactaccgcaaagattggttctttgcccac
attgtcagtcattattactatcggtaa
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