KEGG   Pistacia vera (pistachio): 116138105
Entry
116138105         CDS       T07386                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116138105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvy03021]
    116138105
Enzymes [BR:pvy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     116138105
Transcription machinery [BR:pvy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     116138105
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 116138105
NCBI-ProteinID: XP_031279700
LinkDB
Position
Unknown
AA seq 1180 aa
MASKGEKFSSGADMDIDDDEVTDLSSIADLDEESLKTFCRKASMSFFNEYGLISHQINSY
NDFIENGIQKVFDSAGETIIEPGYDPSKKKEPHWHYASVRFGKVTLDKPSFFAGTEGGAD
HNMLPRHARLQNMTYSSRMKVNVTLQVYTQKNVRSDKFKTGKEQYIQKEVLREDNKDIVI
GRIPVMVKSDLCWMKDADKRDCDFDHGGYFLIKGAEKIFIAQEHICMRRILISNNQGWTI
AYKSETKRNRLIVRLVEQSKIEGIGGGEKVLTVYFLSTEIPIWVLFFALGVSSDNEIREL
IDYGAEEANISNIFFASIHDADNRFDDFRIRSNALSHVNKLIKSTTFPPGESVEECLNMY
MFPSLPGSKQKARFLGYMVKCLLQAYTGRRKCDNRDNFRNKRLELAGQLLERELKVHIAH
ARRRMIKVLQRDLYPDRTVHPIDYYLDASIVTNGLSRAFSTGAWSHPFKRMERISGVVAT
LGRTNALQTMVDLRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAVT
GLVSTDIREPIVDQLFDCGMEELVDDTTTSLEGMDKIFVNGDWVGVCKDSLSFVAELRSK
RRQRELPNQIEIKRDEQLGEVRIFSDAGRILRPLLVVENLGRINSIKGKNYNFQSLLDMG
IIELVGTEEEEDCFTAWGIKYILKDVKEKKPVKFTHCELDMSFLLGLSCGIIPFANHDHA
RRVLYQAQKHSSQAIGFPTTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKPGYGHNGIL
PRPELYNGQNAIVAVNIHLGYNQEDSLVMNQASMERGMFRSEHIRSYKAEVDNKETMGKK
RISDNIMNFGKMQSTRGRVDCLDDDGFPFIGANLQSGDIVIGRYADSGDHSIKLKHTERG
MVQKVVLSSNDDGKNFAVVSLRQVRSPRLGDKFSSMHGQKGVLGFLESQENFPFTIQGIV
PDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRYATPFSTPSVEAITEQLHRVGFEKW
GSERVYSGRTGAMFNSLIFMGPTFYQRLIHMAEDKVKFRNIGPVHPLTRQPVADRKRYGG
IKFGEMERDCLIAHGASANLHERLFTLSDCSEVHICRKCKNVANVIQRTVSGGRKIRGPY
CRLCESVDDIIKANVPYGAKLLRQELFSMGINLKFETEYC
NT seq 3543 nt   +upstreamnt  +downstreamnt
atggctagtaagggtgaaaagttttcaagtggagctgatatggatatagatgatgatgaa
gttactgacttaagcagcatagctgatctggatgaagaatctctgaaaactttctgcaga
aaggcttctatgtcattctttaacgagtatgggcttattagccaccaaattaattcatac
aatgacttcattgaaaatggtatccagaaggtctttgattctgcgggtgagactataatt
gagcctggttatgatccatcaaagaagaaagaacctcattggcattatgcttctgtaagg
tttgggaaagtcactcttgataagccaagcttttttgctggcactgaagggggtgccgat
cacaatatgcttcctaggcatgccaggcttcagaatatgacatattcatctaggatgaaa
gtaaatgttactcttcaggtttatactcagaaaaacgtcagaagtgacaaatttaaaact
ggaaaagaacaatatattcaaaaggaagttttaagggaggataataaggatattgtgatt
gggaggattccggtgatggtgaagtctgacctctgctggatgaaggatgctgataaacgt
gattgtgattttgaccacggagggtactttctgatcaaaggtgcagaaaaaatttttatt
gctcaagagcacatttgtatgagaagaattttgatatcaaataatcaaggttggactatt
gcatacaaatctgaaacaaaaagaaacagattaattgtgagactggtagagcagtctaaa
attgaaggtattggaggaggtgagaaagtcctcactgtctatttcctgtcgacggagata
cccatatgggtgttattttttgcccttggtgtctcatcagacaacgaaatcagagagctt
atagattacggagctgaagaagcaaacatttcgaatatattctttgcctcaatccatgat
gctgataatagatttgacgacttccgaatacgcagtaatgctctcagtcacgtaaataaa
ctgattaaaagtaccacatttccacctggggaaagtgttgaagagtgcctgaacatgtat
atgtttcccagtctccctggctcaaagcaaaaggctcggtttctaggctatatggtgaag
tgccttttacaggcttatacaggtcgtagaaagtgtgataatcgggacaattttagaaac
aagaggttggagttggcaggtcagttgcttgaacgagagttgaaagtgcatattgcacat
gctcgtaggcgcatgatcaaggttttgcagagagatctttatccagatcgtacagtgcat
ccaattgattactatcttgatgcgtccatagttaccaatggtctttccagagcgttctcc
actggagcatggtcacatccctttaagcgaatggaaaggatctctggtgttgtggcaaca
cttggccgtacaaatgccttgcagactatggttgatttgaggagaacaagacagcaagtt
cagtacactgggaaggttggagatgccagatacccgcatccttctcattggggtaaggtt
tgctttctgtctacgccagatggtgaaaattgtgggcttgtcaaaaatttggctgttacc
ggacttgtaagtacagacatacgggaaccaatagttgatcaattgtttgattgtggaatg
gaggaactggtagatgatactactacttcactggaaggaatggataaaatctttgttaat
ggggactgggttggagtttgtaaggattccctttcgtttgttgctgagctaagaagtaag
cgacgacagagagagttaccaaatcagattgaaataaaaagagatgaacagctaggtgaa
gtaagaatattttctgatgctgggaggatattgcgccctcttttggttgtggagaatttg
ggcagaattaactcaattaaaggaaagaattacaacttccaatctcttctagacatgggt
attatcgagcttgttggaactgaagaagaagaggattgtttcactgcatggggtattaaa
tacattctgaaggatgtgaaagaaaagaaacctgtgaagttcactcactgtgaacttgat
atgtcattcttgttaggtttgagttgtggaattatcccatttgccaaccatgaccatgca
agaagggttttatatcaagcacagaaacattcttcacaggctattggttttcccacaaca
aatccaaacatacgagtggatacgctgtcccatcagctgtattatccacaaaggcctcta
tttcggacaatgacttctgattgtcttggtaaacctggttatgggcataatggaatactg
ccaagaccagagctctacaatggacagaatgccatcgtagctgtcaatattcatctggga
tacaaccaagaggattctttggtgatgaaccaagcatctatggaacgtggtatgtttcga
tctgagcacatcagaagttacaaggctgaggttgataacaaagaaacaatgggaaagaaa
aggatctctgataatattatgaattttggaaagatgcaaagtacaagaggacgtgttgat
tgccttgatgatgatggttttcctttcattggggctaacctccagagtggtgacattgtt
atagggaggtatgccgattctggggatcacagcataaaactaaagcacacagaaagaggc
atggtacagaaagttgttctttcttctaacgatgatgggaagaactttgctgtggtatct
ttgagacaggttcgatctccacgtcttggagacaagttctcgagcatgcatgggcaaaaa
ggtgttttaggttttctggaatcccaagaaaatttccctttcacaatacaaggaattgtc
ccagatattgttataaacccacatgcgtttccttcacggcaaactcctggtcaactcttg
gaggctgctttagggaaggggattgcctgtggtggtttgttgagatatgccacacctttc
tccactccatctgttgaagccatcacggagcagctccacagggttggattcgagaaatgg
ggatcagagagagtgtacagtggccgaactggtgcaatgtttaattcacttatatttatg
ggccctacgttctaccagagactgattcacatggcagaagacaaagtgaaattccggaac
attggaccagtccacccgctcactcgacagccagttgcagacaggaaacggtatggtggg
atcaagttcggtgagatggaacgtgactgccttatagctcatggagcatcagccaacttg
catgaacggctttttacactgagtgattgctctgaggtgcacatttgccgtaaatgcaag
aatgtggcaaacgtgatccaacggacagtgagtggtggacgcaagatcagggggccatac
tgccgattatgtgaatctgtcgatgacatcatcaaggcaaatgtgccttatggcgccaag
ttattgcgccaggagctttttagcatgggtatcaatttgaagtttgaaacagaatactgt
taa

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