Pistacia vera (pistachio): 116138511
Help
Entry
116138511 CDS
T07386
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvy04121
]
116138511
Ubiquitin system [BR:
pvy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116138511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
116138511
NCBI-ProteinID:
XP_031280080
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MESFPFHDGNIYNSLDSRLTDTRHDVNHSMQMHSSMLRRLSQERELEGHQGCVNAISWNS
TGSLLISGSDDTRINIWSYSSRKLLHSIETGHSANIFCTKFVPETSDELVVSGAGDAEVR
LFNLSRFSGRGPDENAIPPSALYHCHTRRVKKIAVEVGNPHVVWSASEDGTLRQHDFREG
ASCPPAGSSHQECRNVLLDLRCGAKRSLVDPPKQTLALKSCDISSTRPHLLLVGGSDAFA
RLYDRRMLTPLTSCRKRMSPPPCINYFCPMHLSEHGRSNLHLTHVTFSPNGEEVLLSYSG
EHVYLMDVNQACGSAMRYTAGDASKMMSFMPVLDRVELHPSVSDVPCNGLAARLEKCRML
IEIAGNYLEEGANPFYGVEACNEVLEGHGSEIGSILRHECLCTRAALLLKRKWKNDAYIA
IRDCYNARRIDNASFGAHYYMSEALEQLSKYKQALEFALAAQCLDPSNSSVAEKVENLKK
QIAAAESAKNKKANDGAARPEPRSGRVLSLSDILYRSEVNSDASQDGPRSEREDSDYDEE
LEVDFETSISGDEGRDVESNVLHGSLNLRIHRRGDASKEIGGNGSCGSPASSSQNDWTPY
EPEAVIDMKRRFVGHCNVGTDIKQASFLGQRGDYVASGSDDGRWFIWEKRTGRLIKMLVG
DDAVVNCVQCHPFDSVVATSGIDSTIKIWTPTASVPSIVAGGAAGPETADVLEAMESNQR
KLCRSREAILPYELLERFRMHEFSEGSLHPFECAQS
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggagagttttccgtttcacgatggcaatatctataattctctcgatagcagactcact
gacactcgccacgatgttaatcatagtatgcaaatgcactcgtcaatgctacggaggctt
tcgcaggaaagagaattggaggggcatcagggttgtgtgaatgccatttcttggaattcc
acaggttcacttctgatatctgggtcagatgacacacggatcaacatttggagctattct
agtcgaaagcttttgcattccatagagactgggcattctgcaaacatattctgtacaaaa
tttgtccctgaaacttctgatgaacttgtggtttctggggctggagatgcagaagttcgg
ctgttcaatctttctcgatttagtgggagaggccctgatgaaaatgctattcctccatca
gctctgtatcattgtcacaccagaagagtaaaaaaaatagcagttgaagttggaaaccca
catgtggtttggagtgcaagtgaagatgggactttgagacagcatgattttcgggagggt
gcttcttgtcctcctgctggatcttctcatcaagaatgtcgtaatgttctgcttgattta
cgttgtggggcaaagaggtctctagttgatccccctaaacaaactctcgctttgaagtct
tgtgatattagttccactaggcctcatttactcctggttggtgggagcgatgcatttgct
cgtttatatgatagaaggatgcttactccattgacttcttgtcgaaaaagaatgtcacca
ccaccttgcattaactatttctgcccaatgcatctttctgaacatggtcgttctaacttg
cacctgacacatgttacttttagtccaaatggagaagaggttctcctcagttatagcgga
gagcatgtatatcttatggatgtaaaccaggcttgtgggagtgctatgcgatatactgca
ggagatgcttcaaaaatgatgagtttcatgcctgtacttgacagggttgaattgcatcca
tcagtatctgatgttccctgcaatggtcttgctgccaggcttgaaaagtgcaggatgtta
attgaaattgctggaaattacttagaggaaggggctaatcctttctatggagttgaggca
tgcaatgaagttttggaagggcatggtagtgaaattggatccatactgaggcatgaatgt
ctttgcacgcgtgctgccttattgcttaagcgaaagtggaaaaatgatgcctatattgcc
ataagagattgctacaacgctcgaagaattgataatgcttcctttggagctcattactat
atgtctgaagctctagagcagttgtccaaatataaacaagctttagaatttgctcttgcc
gcccaatgtctggatccatccaattccagtgtggcagaaaaggtggagaacttaaagaag
caaattgctgcagctgaatcggcaaaaaataaaaaggcaaatgatggcgcggcaaggcct
gaacctcgatctggaagagtactctcattgagtgatatactctaccggtcagaggttaat
agtgatgcttctcaagatggtccaaggtctgaaagagaagattctgattatgatgaagaa
ttggaggtggactttgaaacatcaatatcaggtgatgaaggtcgtgatgttgaatccaat
gttctacatggaagtttgaatctgagaatccatcgaagaggtgatgcctctaaagaaatt
ggtggaaatggttcctgtggttcacctgcctcatcatctcaaaatgattggacgccttac
gagcctgaggcagttattgatatgaaacgtagatttgttggccactgtaatgttggaact
gacattaagcaagccagttttcttggtcaacgaggtgactatgttgcaagcgggagtgat
gatggtagatggtttatttgggaaaagcgaactggcagattgattaaaatgcttgttgga
gatgatgctgttgtgaactgcgtgcagtgccatccctttgattctgttgtggcaaccagt
ggaattgatagcacaataaagatatggactcctactgcttctgttccctcaattgttgct
ggaggagcggcgggacctgaaacggctgatgtattggaagccatggagagcaatcaacga
aaattatgtcgtagtcgtgaagctatcctgccctatgaacttcttgaacggtttcgaatg
catgaattttctgaaggatccctgcatccatttgagtgtgctcagagctaa
DBGET
integrated database retrieval system
