Pistacia vera (pistachio): 116138969
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Entry
116138969 CDS
T07386
Name
(RefSeq) ABC transporter B family member 28-like
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116138969
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvy02000
]
116138969
Transporters [BR:
pvy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
116138969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_22
AAA_16
AAA_5
AAA_29
RsgA_GTPase
AAA_30
AAA_28
AAA_15
Zeta_toxin
AAA_25
AAA_33
AAA_23
Rad17
Motif
Other DBs
NCBI-GeneID:
116138969
NCBI-ProteinID:
XP_031280499
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MATAATTPPLLLRTNPTRLPPSGRYALTKPPRLFRTSPVRQSRGFPPILRTKFNTKRSIS
CAYVTGPASDPIVSEPDLRLHESDSRTEEIQSPPNLITWGLLWSLLMKHKLRLGLSVLTL
VGGTTCTLSMPIFSGRFFEVLIGARPEPLWRLLSKVGLLYALEPIFTVIFVVNMSTVWEN
VMSIVRAQIFRRVLIQKAEFFDRYKVGELSGLLTSDLGSLKDLVSENISRDRGFRALSEV
VGTICILFALAPQLAPILGLLMLTVSVLVAVYKRSTVPIFKAHGMAQASMSDCVAETFSA
IRTVRSFGGEKRQMLMFGSQVLAYRNSGIKLGTFKSLNESLTRVAIYISLLALYSLGGSK
VKAGELSVGTVASFIGYTFTLTFAVQGLVNTFGDLRGTFAAVERINSVLSGTEVDEALAY
GLDREIQQKEVKDENIKLFLSNDSIGKNQYSNMDYMSALKSASNVCTVAWSGDVCLEDVH
FSYPLRPDVEILSGLNLTLKCGTVTALVGPSGAGKSTIVQLLARFYEPTRGRITVSEEDV
RTFDKSEWAHVVSIVNQEPVLFSVSVGENIAYGLPDDNVSKDDIIKAAKAANAHEFIISL
PHGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNHL
MKGRTTIVIAHRLSTVQNAHQIALFSDGRVAELGTHFELLAKKGQYASLVDTQRLAFE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgctgccacaactcccccgctccttctccgaaccaatcccactcgccttcca
ccttcaggccgctacgcgctcaccaaacctcctagactctttcgaacttctcctgtccgc
caatcccgtggtttcccgccaattctacgcacaaaattcaacaccaaacgttcaatctcg
tgtgcttacgtcactggacccgcttctgacccgatcgtcagtgagcccgacctgaggctc
catgagtcggattcgcggactgaggaaattcaatcacctccgaacttgattacttggggg
ctgttatggagtctgttaatgaagcacaagctgaggttaggtctctcagttttgactctc
gttggtggcaccacgtgtactctttctatgcccatattttcagggcggttttttgaagtg
ctaataggcgcgaggccagagccgttgtggaggttgctgagtaaggttggactactgtac
gcactggagccaatcttcactgttatttttgttgtaaatatgagcacagtgtgggagaat
gttatgtctatagttagagcgcagatttttagaagagtattgattcagaaggcggagttt
tttgaccgatacaaggtcggagaactcagtggtttgttaacgtctgatttaggttctctt
aaagatcttgtcagtgagaacatttcaagagatcgtggatttcgggcactttctgaggtt
gttggcacaatatgcattctatttgctctagcccctcagcttgcaccaattctgggccta
ctgatgcttactgtgtctgttttagtcgctgtatacaaacgatcaactgtgcctattttt
aaagctcatggaatggctcaggcatctatgtctgattgtgtggcagaaactttctctgct
attcggactgtaagatcgtttggtggtgaaaagcgacaaatgttaatgttcggtagccag
gttcttgcttatcggaatagtggcataaagcttgggactttcaaatctttgaatgaatct
ttgactagagtagccatatatatttctctgttggctttatattcccttggaggaagcaaa
gtgaaggcgggggaactctctgttggaactgtggcttcttttattggatacactttcaca
ctaacctttgcggtccaaggactggttaatacatttggagatttacgtggaacttttgct
gctgttgagaggattaattctgttttatctggaacagaagttgatgaagcacttgcttat
ggactggatagagaaatccagcaaaaagaagtgaaggatgaaaatattaaattgttctta
tccaatgactcaattggaaaaaatcaatattcaaatatggattacatgtcagctttaaaa
tcagcaagcaatgtgtgtactgttgcttggtctggtgatgtttgccttgaagatgtgcac
ttttcttatccgttgagacctgatgttgaaattctaagtggtcttaatttgacactaaaa
tgtggaactgtgacagctctagttggcccaagtggtgcgggcaaaagtacaatagtacag
ctgttggcacgtttctatgagccaacaagaggacgtataacagttagtgaagaggatgtc
cggacttttgacaagagtgaatgggctcatgttgtctccatagtaaatcaagaacctgtc
cttttttccgtgtctgttggtgaaaatattgcatatgggcttccagatgataatgtatcc
aaggatgatattataaaagcagccaaagcagcaaatgctcatgagtttataatttctctt
cctcatggctatgacacactagttggtgagcgtggaggtcttttgagtggaggccagaga
cagagaattgctattgctagagctctactgaagaatgccccaatactgattcttgatgag
gctaccagtgcactggatgcagttagtgaacgcctggtccaggatgctctgaaccatctt
atgaagggcaggacaacaatagtgattgctcatagattaagcacagttcagaatgcgcac
caaattgcacttttttctgatggtagggttgcagagctgggaactcatttcgaattgctg
gctaagaagggtcaatatgcttctttagttgacactcaacggctggcatttgagtga
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