KEGG   Pistacia vera (pistachio): 116139027
Entry
116139027         CDS       T07386                                 
Name
(RefSeq) DNA mismatch repair protein PMS1
  KO
K10858  DNA mismatch repair protein PMS2
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03430  Mismatch repair
pvy03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    116139027
   03460 Fanconi anemia pathway
    116139027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116139027
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     116139027
SSDB
Motif
Pfam: DNA_mis_repair MutL_C HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 116139027
NCBI-ProteinID: XP_031280569
LinkDB
Position
Unknown
AA seq 901 aa
MESETLIKSPIIRPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEIALKEYGA
ECFQVIDNGCGISPNNFKVLALKHHTSKLADFPDLQSLTTFGFRGEALSSLCALGNLTVE
TRTKNESVATHLTFDHSGLLTAEKKTARQIGTTITVKKLFSNLPVRSKEFSRNIRKEYGK
LISLLNAYALIAKGVRLVCTNTTGRNVKSVVLKTQGTGSLRDNIITVFGMNTFSCLEPVT
VCVSDNCKVEGFLSKPGQGSGRNLGDRQYFFVNGRPVDMPKVSKLVNELYKGANSRQYPI
AIMNFTVPTRACDVNVTPDKRKIFFSDECSILHVLREGLQQIYSPSNASYSVNKVEEHSR
EADSFEFCSTREKSPVMLEQSSADGIKSKEVQKKQASGSNTHLEIKIDTQRSQAIEGSVH
CTEENLVVKDFTLRPHDNKKGDIFPKYSPSSSRVIEKIVAENRESNSRSSCIQSSINKFI
TVSKRKYESIGTTLSEVPLLRNQSLQCQLKINSAAGTNSPVKYNSGDDSAEMNKNEPFKC
LRTDKVFKEIENPLFSEANADGRPGEDLVTQQKVMPVVISPSSEGLQKTSGLSAAASPLK
FSGSLLDAPVPSSGLDICSTLQFSFEELRKRRKQRLSRTQSSSFLSGNVKMRRCYAAATL
ELSHPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKVDNDLFIVDQHA
ADEKYNFERLSESTILNQQPLLQPLRLELTPEEEIVASMHMDTIRKNGFALEEDPQALTG
QRFKLKAVPFSKNITFGVEDVKDLISSLSDSEGECSIISAYKMDSADSVCPSRVRAMLAS
RACRSSVMIGDALGRNEMQKILGHLVGLKSPWNCPHGRPTMRHLVDLATIRKTYNENDAN
C
NT seq 2706 nt   +upstreamnt  +downstreamnt
atggaatcagaaaccttaattaaatctccgatcattagacccataaataaaggtgtggtt
cacagaatctgtgccggtcaagtcattttggacctctcatctgcggttaaggagctagtt
gaaaacagcttggacgccggtgcaaccagcatcgaaatcgcattgaaagaatacggcgca
gagtgtttccaggttatcgacaatggctgtggcatttcacccaataatttcaaggttcta
gcgcttaagcatcatacttccaaattggcggattttccagatcttcagtctctgacaaca
tttggttttagaggagaggcactgagttcactttgtgcattaggaaatctgactgttgaa
acaagaacgaaaaatgagtcagttgcaacacacttgacttttgaccattcaggtctacta
acagctgaaaagaaaactgcacgtcaaattggtaccaccatcaccgttaagaaattattc
tcaaatttacctgttcgaagcaaagaatttagtcgcaacatacgtaaggaatatggaaag
ctaatttctttgttaaatgcctatgcacttattgctaaaggagttcggttggtctgcacc
aacaccaccggaagaaatgtgaaatctgtggtacttaaaacacaaggaactggttccctt
agagataacatcataacagtgtttggaatgaacactttcagctgcttagagcctgtgact
gtatgtgtatcagacaattgcaaagttgaaggtttcctttccaagcccggacagggtagc
ggacgcaatttgggagataggcaatatttttttgtaaatggccgacctgtagatatgcct
aaagtgagcaagctagtgaatgaattatataaaggtgcaaactcacgacaatatcccatt
gcgattatgaatttcactgtccctactagagcatgtgatgttaatgtgactcctgataaa
cgaaaaatattcttttctgatgaatgctccatattacatgttctaagagagggtttacag
cagatctattccccaagtaatgccagttattctgttaataaagttgaagagcattcaagg
gaagcagatagctttgagttttgttctactcgcgaaaaatctcctgtgatgttagaacag
tcatctgcagatggaattaagtctaaagaagttcagaagaaacaagcttcagggagcaat
actcatttagaaattaaaattgatactcagcgctcacaagccatagaaggatcagtccac
tgtaccgaggaaaatttagtggtgaaggacttcactcttagaccacacgacaataagaag
ggtgatatttttccaaagtattctccatcatcttcaagagtgattgagaaaatagttgct
gaaaatagagagtcaaatagtcgctcaagctgtattcagtcatcaattaacaaatttata
actgtgagtaagaggaagtatgaatctattggtacaacattatctgaagtgcctctccta
agaaaccagagccttcagtgtcaattgaagatcaattctgctgcgggtacaaattcccca
gttaagtataactcgggtgatgattctgctgagatgaacaagaatgagccgttcaagtgc
cttagaacagacaaggttttcaaggaaattgaaaatccccttttttctgaagccaatgct
gatggaagacctggagaggacttagtcactcaacaaaaagtcatgcctgttgttatttca
ccatctagtgagggtctccaaaaaacttctggtctttcagctgcagcttctcctttaaag
ttttctggatcactgctggatgctccggtgccttcttctggactggatatatgttctacc
ttgcaatttagttttgaagaattaaggaaaaggaggaagcaaaggctgtctagaacacaa
tctagcagttttctgtctggaaatgtaaagatgagaaggtgctatgctgctgcaacacta
gagctttctcacccagaaaatgaggagcgtaaagcaagggctttagctgctgcgactact
gaactggaaagactctttagaaaagaagactttggtagaatgaaggtgattggacaattc
aatcttggatttattattgggaaggtagacaatgatttgtttattgtggatcagcatgct
gctgatgagaagtacaattttgagcgtttgtctgaatcgaccatcttgaatcagcagcct
ttgcttcaaccattgaggttggagttaactcctgaagaagaaattgttgcttcaatgcat
atggacacaattaggaaaaatggatttgcattggaagaggacccacaagctctgacaggg
caacgttttaaactcaaagctgttcccttcagtaaaaacataacttttggagttgaagat
gtgaaggacctgatttcatctctttctgatagtgaaggggaatgttcaattatcagtgct
tacaaaatggacagtgctgattctgtttgcccatctagagttcgtgcaatgctggcttcc
cgtgcatgcagatcatctgttatgattggagatgcgctaggaagaaatgagatgcagaag
atccttgggcatctggtaggcctgaagtctccttggaattgcccacatggccgtccaacc
atgcgtcatttggttgatttggcaaccatccgcaaaacttacaatgaaaatgatgcaaac
tgttga

DBGET integrated database retrieval system