Pistacia vera (pistachio): 116139196
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Entry
116139196 CDS
T07386
Name
(RefSeq) DDB1- and CUL4-associated factor 8-like
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvy04121
]
116139196
Ubiquitin system [BR:
pvy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116139196
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
PROPPIN
Motif
Other DBs
NCBI-GeneID:
116139196
NCBI-ProteinID:
XP_031280719
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MKTSFKETRDGFTEIYRREMGLSRPRDVTRRLSSSEGLVKQIDLHGKLNGHEGCVNAVEF
NSTGDLLVSGSDDKHVIFWTWKTGSKLFSYPSGHFDNIFQTRIMPFTDDCKIVTSSADGQ
VRLGQVSEDGQVDTKRLGKHQGRVYKLAVEPGSPYILYSCGEDGFIQHFDLRSNSGTRLF
YCSSFTENSKQPPNSIRLNAMVIDPRNPVYFAVGGSDEYARVYDIRKCKWDASCSSDIPV
NTFCPSRLIGSNNIHITGLAYSSTSELLVSYNDELIYKFEKNMGLGSSPLSIPREDLQKV
EDPPVYTGHRNSQTVKGVSFFGPNDEYVLSGSDCGHIFVWKKKGGKLVRLMLGDRNIVNQ
LEPHPHLPMFATCGIERSVKLWAPMASNVPPLPDNVEKIMESNRQEREDHSRINLTPDVI
MHVLRLQRRQTLAYIERRYNRADVESDDEDEGEAYVLGFSDSDASSEGGGNSRECNIS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgagttttaaggaaactagagatggatttacagagatttacaggagagagatg
ggcttgtctcggcccagagacgtaactcgccggctttcttcttcagaggggctggtgaag
caaattgatcttcatgggaagttaaatggtcatgagggttgtgtgaatgcagtagaattc
aactctactggggaccttcttgtgtcaggttctgatgacaaacatgttatattttggact
tggaaaactggaagcaaattgttctcatatccttctggacacttcgataacatatttcag
acacgaattatgcctttcactgatgattgtaaaatagtaacttcttctgctgatggccag
gtgaggcttggacaagtttcagaggacggccaagttgatacaaaaaggttggggaagcac
caagggcgtgtatacaagcttgctgtggagccaggaagtccctacatattatatagctgt
ggtgaagatggtttcatccaacattttgatctgcgaagtaatagtggtacaaggcttttt
tattgctcctcattcacagaaaacagcaagcagcctccaaatagcataaggttgaatgct
atggtaattgacccgagaaatcctgtttactttgctgtaggaggttctgatgaatatgct
cgtgtttatgacataagaaaatgtaaatgggatgcatcatgtagttcagatatacctgtg
aacacattttgcccctctcgtctgattgggagtaataatattcatatcactggattggct
tactcaagcacaagtgaactgcttgtctcctacaatgatgagctcatttataagtttgag
aagaatatgggattgggttcctcaccattgtccatacctcgtgaagacttacagaaggtt
gaagatccacctgtttacacaggccatagaaattcacagactgttaaaggagtgagtttt
tttggccccaatgatgaatatgtcttaagtgggtctgactgtggccatatatttgtttgg
aagaagaagggaggtaaattggtacggttaatgttaggtgaccggaatatagtaaatcaa
cttgagccccatcctcatttgccaatgtttgcaacttgtggaatagaaagaagtgtaaag
ctctgggctcccatggcgagtaatgttcctccattgcctgacaatgtagaaaagattatg
gagtctaataggcaggaaagagaggaccattcacggataaatcttactcctgatgttatc
atgcatgttttgaggctgcagaggcggcaaactttggcatacattgaaaggagatacaac
agagctgatgttgagagtgatgatgaagatgaaggggaggcttatgttttgggattttca
gatagtgatgcctcttctgaagggggtggtaactcaagagagtgcaacattagctag
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