Pistacia vera (pistachio): 116140345
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Entry
116140345 CDS
T07386
Name
(RefSeq) TATA-binding protein-associated factor BTAF1 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116140345
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116140345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
HEAT_ECM29
TOR1L1_N
TPR_Trm732_C
HEAT_2
Ribosomal_TL5_C
Motif
Other DBs
NCBI-GeneID:
116140345
NCBI-ProteinID:
XP_031281848
LinkDB
All DBs
Position
Unknown
AA seq
2055 aa
AA seq
DB search
MAQQSSRLNRLLTLLDTGSTQGTRFTAARQIGDIAKSHPQDLSSLLRKVSQYLRSKNWDT
RVAAAHAIGAIAQNIKHTSMTELFASVESKMCEAGISGIVEDVVAWPGFHSKIVTSVSFR
SYDINKVLEFGALLASGGQEYDIAIDNSKNPRDRLTRQKQSLKRRLGLDVCEQFMDVNDM
IKDEDLIEHKLHSHGNGLDRRFYMSPSVRNIQQLVSSMVPSVISKRPSARELNLLKRKAK
INSKDQVKGWSEDGDMEVSHAHSATTPKGSRVDPLSSNKVDAIPEEDNLEHDGDGQWPFH
SFVEQLILDMFDPVWEVRHGSVMALREILTHHGASAGVFMPDLSPDGALDVDFKDKNFSS
AMKREREIDLNMQVPADDSEPHLKKMKFEESPTMLMDALVSPVKSENFDINIKVEDSGCT
LPAQQVNGQFDAGSIKLEPESNLDGLFNQSKEDVHIAEPKGYCDVKQASLNSEMLKNLPE
NCELMNWLKLVRHSWQKNCEFLQDCAIRFLCILSLDRFGDYVSDQVVAPVRETCAQALGA
AFKYMHPSLVHETLYILLQMQHRPEWEIRHGSLLGIKYLVAVRQEMLRDLLGYVLPACKA
GLEDPDDDVRAVAADALIPAAAAIVALDGQTLHSIVMLLWDILLDLDDLSPSTSSVMNLL
AEIYSQEEMIPIMFGATSKDKQDFDLNEVVHSDDVGEGRDSQENPYTLSMLAPRLWPFMR
HSITSVRHSAIRTLERLLEAVYKRNISEPSCGSFWPSFILGDTLRIVFQNLLLESNEEIL
QCSDRVWRLLVQCPVNDLEAAAGLFMSSWIELATTPCGSQLDVAKMFWPVAPPRKSHYKA
AAKMRAVMLENESSGNIVLDHMKGNLPQERNGDASTNSFKIIVGADVEMSVTYTRVVTAS
ALGIFASKLPEGSVKYVIDPLWNALSSLSGVQRQVASMVLISWFKEIKSKELPGSPGVLP
VFPDHLKQWLLDLLACSDPTFPTKDSLLPYAELSRTYTKMRNEASQLLRAVEASGVFTNI
LSTIKIDVESLSVDDTISFASKLQPVCKDSDGNESLDRHIVDDIESLKQRLLTTSGYLKC
VQSNLHVTVSALVAAAVVWMSELPARLNPIILPLMASIKREQEEILQQKAAEALAELISH
CIARKPGPNDKLIKNMCSLTCMDPCETPQAAIISSMEMIDDQDFLTFGSSTGKQKSKIHM
LAGGEDRSRVEGFISRRGSELALRHLCEKFGASLFDKLPKIWDCLTEVLIPANSYDDKEI
TQAIESVKDPQILINNIQVVRSIAPMLDETLKPKLLSLLPCIFKCVCHTHVAVRLAVSRC
ITSMAKSMIVNVMAAVIENAIPMLGDMTSVHTRQGSGMLISLLVQGLGVELVPYAPLLVV
PLLRCMSDCDHSVRQSVTRSFASLVPLLPLARGLPPPAGLSEGLSRNAEDAQFLEQLLDN
SHIDDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVASNIA
ELRSSNNAEDVHPSLIVCPSTLVGHWAFEIEKYIDASLVSTLQYVGSAQDRISLREHFDK
HNVIITSYDVVRKDVDYLGQCLWNYCILDEGHIIKNSKSKITVAIKQLKAQHRLVLSGTP
IQNNITDLWSLFDFLMPGFLGTERQFHATYGKPLVAARDSKCSAKDAEAGVLAMEALHKQ
VMPFLLRRTKDEVLSDLPEKIIQDRYCDLSPVQLKLYEKFSGSHVKEEISSMVKIDESAD
KGEGNSASPKASTHVFQVIFQALQYLLKLCSHPLLVLSQKVPESLSCHLSELFPSGSDII
SELHKLQHSPKLVALQEIMEECGIGVDASSSEGALHVGQHRVLIFAQHKALLDIIERDLF
QTHMKNVTYLRLDGSVEPEKRFDIVKAFNSDPTIDALLLTTHVGGLGLNLTSADTLIFME
HDWNPMRDHQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENSS
LKTMNTDQLLDLFASAENTRKGGTISKRSSDDVDPKLMGTGKGVKAILGGLEELWDQSQY
TEEYNLSQFLSKLNG
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaatcgtcgcggctcaaccgcttactcactttgttggacactggttcaaca
caaggaacaagatttacagctgcgcggcagataggggatattgcgaaatcacatcctcaa
gatttgagttctctattgagaaaggtttctcagtatcttcgtagtaaaaattgggataca
agggtggctgctgctcatgctattggggctattgctcagaatattaagcatacatctatg
actgaattattcgcttctgtagagtcaaagatgtgtgaagctgggatatctggtattgtt
gaagatgtggtggcgtggcctggttttcattctaaaattgtaacaagtgtttcatttaga
agttatgatatcaataaggtattggagtttggtgctttattagcatctggtggacaggag
tacgacattgcaattgataattctaagaatcctagggatcgattgacaaggcagaagcaa
agtcttaaacgccgtttgggtttggatgtatgtgagcagtttatggatgtcaatgatatg
atcaaagatgaagatcttattgagcacaaattacattcccatggaaatggtttagaccgt
agattttacatgtctccttctgtacgtaatatccaacaactagtttcgagtatggttccc
agtgttatttctaaaaggccaagtgcaagagaattaaatctcttaaagcgaaaagcaaaa
ataaattcgaaagaccaagtaaaaggttggtctgaggatggagatatggaagtctctcat
gctcacagcgcaacaactccaaagggctcacgtgttgatccattgagttcaaataaggtg
gatgctattcctgaggaagacaacttggagcatgatggagatgggcagtggccgttccat
agttttgttgaacagctcatccttgatatgtttgatcctgtttgggaggttcgccacggt
agtgttatggcattgagagaaattttgactcatcatggtgcttctgctggagtgtttatg
cctgacttaagccccgatggtgcactagatgttgactttaaggacaaaaacttttcaagt
gcgatgaagagagagagagaaattgatttgaatatgcaagttccagcagatgattcagag
ccacatctgaaaaagatgaagtttgaagagtcaccaacaatgctgatggatgcattggtc
tctcctgtaaagtctgaaaactttgacatcaacataaaggttgaagatagtggatgcact
ttacctgcacagcaggtcaatggccaatttgatgctggttctattaagttggagccagaa
tctaatcttgatggtctattcaatcagtccaaggaagacgttcacatagcagagccgaag
ggttattgtgatgttaagcaggcctctttaaactctgagatgttgaaaaatcttcctgaa
aactgtgagctgatgaactggttgaaactagttcggcattcatggcagaaaaattgtgaa
tttcttcaagactgtgcaattcgtttcttatgtatattatcactagatcggtttggagat
tatgtatctgatcaggttgttgctcctgtacgtgaaacctgtgctcaagcattaggtgct
gcttttaagtatatgcatccctccttagttcatgagacgttgtatatcttgctgcaaatg
cagcatagaccagaatgggaaattcgtcatggaagcctcttgggcatcaagtacctggta
gctgtgcgacaggagatgctgcgggatcttcttggctacgttcttcctgcatgtaaagct
gggctggaggaccctgatgatgacgtccgagcagttgctgcagatgctttaatacctgct
gcagctgctattgttgctttagatggtcaaacattgcattccattgtgatgctactttgg
gatatattgcttgatttggatgatcttagcccatccactagtagtgtgatgaatctatta
gcggaaatctattcgcaggaagagatgattcctataatgtttggagccacatctaaagat
aaacaggattttgatctgaatgaagtagtccatagtgatgatgtaggagaaggaagagac
tctcaggaaaatccttacactttatccatgctggcaccccgtttatggccttttatgagg
catagcatcacatcagttcgacattcagctattcgtactttggagcgccttcttgaagct
gtttacaaaaggaatatttctgagccctcttgcggttccttttggccatcttttattttg
ggtgatacacttaggattgttttccagaatcttctattggaatcaaatgaagaaattctg
cagtgttcagatagagtttggagactgcttgttcagtgcccagttaatgacttggaagct
gctgctggcttgtttatgtcttcttggatagaacttgctaccacaccttgtggctcacaa
ttagatgtggcaaaaatgttttggcctgtggctcctcctcgaaaaagtcattataaagca
gctgctaaaatgagagctgtgatgcttgagaacgagtcatctggaaatattgttttggat
catatgaaaggaaatcttccacaggaaaggaacggagatgcttccactaactcatttaag
ataattgttggtgctgatgtggaaatgtcagtaacttatactcgagttgttaccgcatca
gcattgggaatttttgcttctaagttgcctgagggttcagtgaaatatgtgattgatcca
ttgtggaatgccctttcctctttatctggagtccagcgccaggtggcatccatggttctc
atttcttggtttaaagagatcaaaagcaaggaacttcctggatcacctggagttttgcct
gtatttcctgatcatctcaaacaatggttgttggatttgttagcatgctccgaccctaca
tttcccacaaaagattcactccttccgtatgctgagctttcaagaacatataccaagatg
cgaaatgaagctagccaattgttacgtgctgttgaggcatctggcgtgtttacaaatata
ttgtcaacaattaaaattgatgtggaaagcttgagtgtagatgatacaatcagctttgca
tcgaaactgcagcctgtatgcaaggatagtgatggaaatgaatctttggataggcatatt
gttgatgatatagagtcattgaaacagcgactgttgacgacttcaggctatctaaaatgt
gttcagagtaatttgcatgtcactgtgtcagccttagttgctgctgcagtcgtctggatg
tcagagcttcctgcccgacttaatcccatcattttgcctttgatggcttcaatcaaaaga
gagcaggaggaaatactacaacagaaggctgctgaggcgcttgcagagcttatttctcat
tgcattgctcgtaagcctggtccaaatgataagttaataaaaaatatgtgtagtttgacg
tgtatggacccttgtgagacacctcaagctgcaattatcagctccatggagatgattgat
gatcaagatttccttacctttggaagtagtacaggaaaacagaagtcaaagattcacatg
ctagctggtggtgaagaccggtcaagagttgaaggctttattagcagaagagggtctgaa
ctcgcattaaggcatttgtgtgagaagtttggtgcttcattatttgataagctccccaaa
atttgggactgccttactgaagttctcatccctgcgaattcttatgatgataaggaaatt
acacaagctattgaatctgttaaggatcctcagatcttgattaataatatccaggttgta
cgttccatcgctccaatgctggatgagactttgaaaccaaaactgctatcacttcttcca
tgcattttcaaatgtgtttgccacactcatgttgctgtccgacttgccgtttccagatgt
attacttcaatggccaagtcaatgatagtaaatgttatggcagctgtaattgaaaatgcc
attccaatgttaggtgatatgacatctgttcataccagacaaggttctggtatgcttatc
agtttgcttgttcagggattgggtgtggaacttgttccatatgctccgttgttagttgtg
cctcttttgaggtgtatgagtgattgtgatcattctgttagacagagtgtgactcgtagt
tttgcatctcttgtaccactgcttccattagcacggggccttcccccacctgcagggctg
agtgaaggtttgtcaagaaatgcagaggatgcacagtttttggagcaattacttgacaac
tcccatattgatgattataagctctgcactgaactaaaagtaacattgagaaggtaccaa
caggaaggtataaattggttggcctttttaaaacgtttcaagcttcatggaatcttatgt
gatgatatggggcttggaaagacactgcaagcatctgctattgtagcatctaacatagcc
gagcttcgttcttcaaacaatgctgaggatgttcatccgtctttgattgtttgcccatct
actcttgttggtcattgggcattcgagatagaaaagtatattgatgcttctttagttagt
actcttcaatatgtggggtctgcacaagaccgcatttctcttagagagcattttgataag
cataatgtgatcattacgtcttatgatgtggtacgcaaagatgttgattatcttggacaa
tgtctctggaattactgtattttggatgaagggcatatcatcaagaactctaaatctaaa
attacagtcgcaataaaacaactgaaagcccagcaccgtctagtacttagtggaacaccg
atccagaacaacatcacagacttgtggtccctttttgacttcctgatgcctgggtttctt
ggaacagagagacaattccatgccacttacgggaagccactggtggccgctagggattct
aaatgttctgcaaaagatgctgaagctggggtacttgctatggaagcattgcacaagcaa
gtcatgcctttcctactccgtcgaaccaaagatgaagttttgtcagacctgcctgaaaag
ataatacaggacagatactgtgatctgagcccagtccaattaaaactttatgaaaagttt
tctggttcacatgttaaagaagaaatctcaagtatggtaaaaattgatgagtcagcagat
aaaggagaaggaaatagtgcttctccgaaagcatctacgcatgtgttccaggtgatattc
caggcactgcaatacctgctgaaactttgtagtcatccattgcttgtcctgagccaaaaa
gttcctgagtcactttcatgccatttgtcagaactctttccttcaggttctgacatcatt
tctgagctacataaactccaacattctcccaaattagttgctcttcaggagataatggag
gagtgtggaataggggtagatgcttccagttctgaaggtgcccttcatgttgggcagcac
agagttttgatattcgctcagcataaagcccttttagatattattgaaagagacttgttt
cagacccatatgaagaatgttacatacctacgcctagatggatcagttgaaccagaaaaa
cgttttgacatagtgaaagctttcaattctgacccaactatagatgccctgctgcttaca
acgcatgttggtggcctgggtttaaatctgacatctgctgacaccctcattttcatggag
catgattggaatccaatgcgggaccatcaggcaatggacagagcacacaggttgggccaa
agaaaggtcgttaatgtccatcgcctcattatgcgtggcaccctggaagagaaagttatg
agcctccaacggttcaaagtttcagttgccaatgctgtcatcaatgccgagaattccagt
ctaaaaacaatgaatactgaccagttgcttgatctatttgcatctgcagaaaatactaga
aagggaggtacaatctcaaagcgctcaagtgatgatgtcgacccaaaattaatgggtaca
ggcaagggcgtaaaggctatactaggtggattggaggagctttgggatcaatcgcagtac
actgaagagtataatctgagccagtttttatcaaagctcaacggctga
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integrated database retrieval system
