KEGG   Pistacia vera (pistachio): 116140491
Entry
116140491         CDS       T07386                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116140491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvy03041]
    116140491
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116140491
Spliceosome [BR:pvy03041]
 Complex B
  Other components
   Prp19 complex
    116140491
 Complex C
   Prp19-CDC5 complex
    116140491
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    116140491
SSDB
Motif
Pfam: BCAS2
Other DBs
NCBI-GeneID: 116140491
NCBI-ProteinID: XP_031281976
LinkDB
Position
Unknown
AA seq 233 aa
MASNSNNGDVLMLEAPPDASRPWNAEIIDALPYIDDDYGDPRVKDEVDRMVKQEMRRSSK
KPSDFLKDLPPLTKFSFQNHPMLAKEYERVRAGKPPVILDTTRYQLEMLPVNKRNDESAW
KQALQKAQRLSQHQVIRLENLELMSKYGPDVWKQHNQRLEAFLSRMQRLAHEQNEKIEAV
NRERKYHQQNTAYEFNALSMQWKELCAKNIEIQAACAKIESQIEELRQEAAER
NT seq 702 nt   +upstreamnt  +downstreamnt
atggcgagcaatagcaacaacggagatgtcctgatgctggaagctccaccggatgcctcc
cggccatggaacgcagaaatcatcgacgcattgccctacatcgacgacgactacggtgat
cccagagtcaaagacgaggtcgaccgcatggtcaagcaggagatgcgtcgcagctcaaaa
aagccttctgattttctcaaagacctcccccctctcaccaagttcagttttcagaatcat
cctatgcttgcgaaagagtacgagcgtgtgagagctgggaagccgcctgtgattcttgat
acgacacggtatcaattggaaatgctgcctgtgaataagagaaacgatgaatctgcttgg
aagcaggcacttcagaaagctcagcgcttgtcacagcatcaagtgatcaggctggaaaat
ttggaattgatgtctaaatatggtcctgatgtctggaagcagcacaaccaacgattagaa
gcattcttatccagaatgcaaagattagcgcatgaacaaaatgaaaagattgaagctgta
aatcgtgaaagaaaataccaccagcaaaacactgcatacgagttcaatgctttgtccatg
caatggaaggagctttgtgcaaaaaatatagaaatccaagctgcatgtgctaaaattgaa
agtcagatagaggaattgaggcaagaagctgctgagaggtaa

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