Pistacia vera (pistachio): 116140564
Help
Entry
116140564 CDS
T07386
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116140564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GH3
GH3_M
GH3_C
Motif
Other DBs
NCBI-GeneID:
116140564
NCBI-ProteinID:
XP_031282034
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MMTDGEILNKLEESTKNANHHQLETLHSILQHQSPVLYLQSHLSLSASNHTSIDAATFKC
AVPLSSYDDYAYHINQLASGSLDHDHDHDNQPLLSVDPLVCFFYSSGTSSMKPKLIPYFD
SALSKAASHLAHQGSAAVLRRLFPLKQDVNKILCFIYADNITTTKGGFKVMAASTFPLYR
SRNESWSRFSYLSSPREVILGSNVEHQMYCHLLCGLRNSEIIDGIINPYAVGLIRAFSFL
ESKWEQLCDDLRNGYPYLDICDNSMRDSVTEVLGGPRPDLSERIRSICRESNWSGIVSKL
WPNVRYIRCVTTGSMRQYCSKVKYYAGEVPVLGGDYFASECCVGINLDIVQPPETTRFVM
LPTAAYFEFLPFDLEKSEIVSEETVDFSGVEVGKMYEVVVTTYRGFYRYRLGDIVKVVGF
YNSSPEVEFVMRAPKSSFDIITERDLMSAMESFQKVLRNVMAAEIVEFASFINLELSPKK
LIIFLEIREGCIFLQEEKLPEAVVLLRRCCSSLEDELGSIYKVQRDKGAVSPLSISILKP
SSFERLFQVAIENGAPASQYKPPKIIRNCEIVQFLEGCSLLTLCLDDLDC
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagacggggaaatcctaaacaagctagaggagtccacgaagaacgctaatcat
caccagctagaaactcttcactcaatccttcaacaccaaagccctgtactttatctccaa
tcccacctctcactttcggcttccaatcatacatccatcgacgccgcaactttcaagtgt
gctgtgccgttatcttcctacgatgactacgcttatcacatcaatcaattggccagtggc
tcccttgatcacgatcacgatcacgacaatcagcctctcctctccgttgacccgttggtt
tgcttcttttacagttctgggacaagttctatgaagccgaaattgattccatattttgac
tcagctctctcgaaagctgcttcacacttagctcaccaaggcagtgctgctgttcttcga
aggttgtttcccctcaagcaggatgttaataagatcctatgttttatttacgcggacaat
ataacaacaacgaaaggtggatttaaggttatggccgcctctacttttcctctgtataga
agtagaaatgagagctggtctcgatttagctatctctctagtccccgggaagtcattctt
ggatcaaatgtggagcaccaaatgtattgccaccttctttgtggtcttaggaactctgaa
attattgatggaattataaatccgtatgccgtaggcttgattagagcatttagtttttta
gaatctaaatgggagcagttatgtgatgatctcagaaatgggtatccgtatttggatatt
tgtgacaattcaatgagagattctgttactgaggttcttggtgggccacgaccagatttg
tcagaaaggattcgatcaatttgtcgggaaagtaactggagcgggattgtgagtaaatta
tggcctaatgttcgttacattaggtgtgttacaactggaagtatgaggcaatattgttca
aaagttaagtattatgcaggagaggttcctgttttgggaggagattattttgcttcagaa
tgttgtgtgggtattaatttggatattgtgcaacctccagagacaacacgatttgttatg
cttccaactgcagcctattttgagtttcttccatttgatttggagaagagtgagattgta
agtgaagaaactgttgatttttctggagttgaggtcgggaagatgtatgaagtggttgtg
actacttatagaggattttataggtaccgtttaggtgatattgtgaaagttgttggtttc
tataattcttctccagaagtggagtttgtgatgagagctccaaaaagttcttttgacata
ataactgagagagacttgatgtctgccatggaaagttttcaaaaggtgctaagaaatgtt
atggctgctgagattgtggagtttgcaagtttcattaacttggagttgagcccaaagaag
ctaataatttttctggaaattagagagggttgcatttttcttcaggaggagaagttacca
gaggcagttgtacttctaaggaggtgttgttcctcacttgaggatgagttgggaagcata
tataaagtgcaaagggataaaggtgcagtaagccctctatcgatatccattttgaaaccc
agtagctttgaaaggttgtttcaagtagccattgagaatggagcaccagctagtcaatat
aaaccacctaagatcataagaaactgtgaaattgttcaatttctggaaggatgttctctt
ctgactctgtgtttggatgatttagattgttaa
DBGET
integrated database retrieval system
