Pistacia vera (pistachio): 116141832
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Entry
116141832 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116141832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvy04131
]
116141832
Membrane trafficking [BR:
pvy04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
116141832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
116141832
NCBI-ProteinID:
XP_031283163
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MMLNVCEDEEKWLAEGIASVQHNAFYMHRALDSNNLREALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEMFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYIKSNE
APAKDVLKDLVEMCRGVQHPIRGLFLRSYLAQVSRDKLPDIGSEYEGDADTVTDAVEFVL
QNFTEMNKLWVRMQHQGPGRVREKREKERSELRDLVGKNLHVLSQIEGVDLEMYKDNVLP
RVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSRLMD
RLSNYAASSTMXVLPEFLQVEXFAKLSNAIGKVIEAQVDMLFLXSCNLYVSLLTFTLRVH
XDRLDYVDQVAEYGACVKKLSSIPKLEDSRATKQHLSAPLEKYNDIVSTLTLSNYPRVMD
HLDNGTNKVMAMVIIQSIMKNSTCISTDEKVEVLFELIKGLIKDVDETAEDELHEEDFKE
EHNSVACLIHMLYNDDSEEMLKIICTVRKHIMTGGPKRLPFTVPPPVFSALRVTFFHYLI
VTILFHCIFRKSEYGIFIFANYRILIQEALGFSAGTVIIVCSVIIVVKMQEYFLGKEQFG
IENVNFPXEEEPATPKKIFQILSQTIEALSSVPSPELALRLYLQCAEAAGDCDLEAAAYE
FFTQAFILYEEEIADSKAQVTAIHLIIGSLQRMNVFGVENRDTLTHKATGYSARLLKKPD
QCRAVYACSHLFWVDDQDGLKDGERVLLCLKRALRIANAAQQMANVARGSSGPVILFVEI
LNKYLYFFEKGNSQITSAAIQSLVELIRTEMQSDSTPDPAANAFFSSTLRYIEFQKHKGG
IMGEKYDSIKV
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgaacgtatgtgaagatgaagagaaatggctggccgaagggatcgctagcgtt
caacataacgccttttacatgcatcgcgctttggactccaacaatctcagagaagctctt
aaatattcagctcagatgctctcggaacttcggacttccaaactttctcctcacaaatac
tacgaactctatatgcgagctttcgatgaattgaggaagctggagatgtttttcaaagat
gaaagcaggcatggtgtatcaattgttgatctgtatgagcttgttcaacacgctggcaat
atactgcccagactgtatctcctgtgtactgttgggtctgtgtacattaaatctaatgag
gctcctgccaaggatgtcctaaaagatcttgtggaaatgtgtcggggtgttcaacatcca
attcgtggtctctttttgaggagttaccttgctcaagtcagcagagataaattacctgat
attggttctgagtatgaaggagatgctgacactgtgacggatgctgtagaatttgtgcta
cagaatttcactgagatgaataaactttgggttcgaatgcagcatcagggacctggtcga
gtgagggagaagcgggagaaggaaaggagcgaacttcgtgatcttgtagggaaaaatctt
catgttctgagtcagattgaaggtgtggaccttgagatgtacaaagacaatgttcttccc
agagtcttagaacaggttgtgaactgtaaagatgaacttgctcaatattatctgatggat
tgcataatccaggtcttccctgacgagtaccacttgcagacccttgagacactgttgggt
gcttgccctcagcttcagccaacagttgacatcaagacagtgctatctcgactaatggat
aggttgtcaaattatgctgcttcaagtacaatgtgagtgttacctgagtttctgcaagta
gaangttttgctaagttgagcaatgccattggcaaggtgatagaagcacaggttgacatg
ctattcttgnngagctgtaacttgtatgtctctcttcttacatttacgcttcgtgttcac
nctgatcggcttgattatgttgaccaagtggctgagtatggagcatgtgttaagaagcta
tccagcataccaaagcttgaagacagcagagcgacgaaacaacatttaagtgctccactg
gaaaaatacaatgatattgtttctacattgactctttctaattatcccagagttatggac
caccttgataatggaacaaacaaagtcatggcaatggttattattcagagcattatgaaa
aatagcacttgcatctcaactgatgagaaggttgaggtgctgttcgaattaataaaaggg
ctcattaaagacgttgatgaaactgcagaggatgagttgcatgaggaggatttcaaggag
gaacataattctgttgcttgcctcatacacatgctttataatgatgactcggaggaaatg
ttaaagattatatgcactgtgaggaaacatatcatgactgggggaccaaaacgactacca
tttacagttcctcctcctgtgttctctgcacttagggtaactttctttcattacttgatt
gtcacaatactatttcattgtatctttagaaaatctgaatatgggatattcatttttgca
aattataggatattgattcaggaggctttaggtttttctgctggaactgttatcatagta
tgttctgttatcatagttgtgaaaatgcaagagtactttttaggtaaagaacaatttgga
atagaaaatgttaattttccaanagaagaagaacccgcaacaccaaaaaaaatatttcag
atcttgagtcagactattgaggctctttcttctgttccatctcctgaactggcattgaga
ttgtacttgcaatgtgctgaggctgctggcgactgtgatcttgaggctgctgcctatgaa
tttttcactcaggcatttatattatatgaagaagaaattgcggactccaaagcccaggtc
actgcgatacatctgataattggatctcttcagaggatgaatgtctttggtgttgagaat
cgggacactctgacgcacaaggctacggggtattcagcaaggttattaaagaagcctgat
caatgtagagcagtttatgcatgttcacatctcttttgggttgatgatcaagatggcctt
aaagacggagaaagggtcctgctttgcctaaagcgtgccttgaggattgcaaatgctgct
caacaaatggccaatgttgcacgtggtagcagtgggcctgtcatactctttgttgaaata
ctgaacaagtatctgtactttttcgagaaaggaaattcacagatcacaagtgcagcaatc
caaagcctggttgaattgatccgtactgaaatgcaaagtgactcaactccagatccagct
gcaaatgctttcttttccagtacattgcggtatattgaattccagaagcataaaggtggt
ataatgggtgagaaatatgattccatcaaggtgtga
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