KEGG   Pistacia vera (pistachio): 116142175
Entry
116142175         CDS       T07386                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
pvy  Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116142175
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    116142175
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 DEAD Prok-RING_4 RING_XB3-XBAT31 zf-RING_5 ResIII zf-RING_4 GIP1_N zf-ANAPC11
Other DBs
NCBI-GeneID: 116142175
NCBI-ProteinID: XP_031283470
LinkDB
Position
Unknown
AA seq 1033 aa
MATKVSEELLSSIRTIVGSEYSDMDIMRALHMANYNPTAAINIIFDTPNFKTPEIKPITA
KPKVIPRKQQESRPLSENGDVSVVCGANGAGDGVVTDLSEDEKRKVSTWKGSEWLFLGWS
YVSGMSTCKGRKLKCGDEVEFSFPLKNLSLPSKSFGRARQSMVACSEIVRFSTKSGGEIG
RIPSEWTRCLLPLVRDKKVMIEGCCKHAPDVLSIMDTIVLSLRVYINNSMFRKHHQASLD
AGSSYGEDSVFHPIPNLFRLLGMTPFMKAEFTPSDLYTRKRPLESKVLSGISPSLLQANK
FKNQSRNESKVENEELISDADLDNIVGVGNSSELEEMDPPSTLQCELRPYQKQALHWMTH
REKGQSMDEAARILHPCWEAYRLADEREPVVYLNSFSGDATTEFPSTLEVSRGGILADAM
GLGKTIMTLALLLTHSERGTPSGSQSQSQHSGEAIEGVDFSDQSPNLPKKAPKFSVLDKV
VTKNPTLPLGGTLIICPMTLLGQWKAEIETHAKPGSLSLYVHYGPGRHKDANILAESDVV
ITTYGVLTSDFSSEFTLQNSENNGGVHSVQWLRVVLDEAHIIKSYKSQISIAAAALVADC
RWCLTGTPIQNNLGDIYSLLRFLRVEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPI
MLRRTKSSTDREGRPILVLPPADIQVIYCELTDVEKDFYEALFKRSKVKFDKFVEQGRVL
HNYASILELLLRLRQCCDHPYLVMSRGDTQEYADLNKLAKRFLKGSHNELEGEAKDMPSR
AYVQEVVEELRKGEQGECPICLEVFEDAVLTPCAHRLCRECLLASWRTPTSGLCPVCRKA
INRQDLITAPTDSRFTVDVEKDWVESSKIVVLLQELENLRKSGSKSIIFSQWTAFLDLLQ
IPLSRNNITFLRLDGTLTQQRREKVLKQFSEDTNVLVLLMSLKAGGVGINLTAASNAFVL
DPWWNPAVEEQAVMRIHRIGQTKRVMIKRFIVKGTVEERMEAVQARKQRMIAGALSDQEV
KSARIQELKMLFT
NT seq 3102 nt   +upstreamnt  +downstreamnt
atggcaaccaaggtctccgaggagctcttatcctctatccgaacgatcgtcggttcggaa
tactctgacatggacataatgagagccctacacatggccaattacaatcccactgctgcc
attaacattatcttcgacactcccaattttaaaaccccagaaatcaagccgataactgca
aagccaaaggtgatcccccgcaaacaacaggagagtaggccattgagtgaaaacggagat
gttagtgttgtttgtggggcgaatggcgcaggagatggtgttgttacggatttgagtgag
gatgagaagcgaaaagtgagtacttggaaaggaagcgagtggttgtttctggggtggagt
tacgtgtcagggatgtccacgtgtaaggggaggaagttgaagtgtggtgatgaagtggag
ttttcttttccattgaagaatttatctttgccaagtaagagttttgggagggcgaggcaa
tcaatggtagcttgttcggagattgtgaggttttcaacaaagagtggtggagagattggt
cgaataccaagtgagtggactcggtgtttgttaccactggtgagggataagaaggtcatg
atcgaaggttgttgcaagcatgctcctgatgtgttgagcataatggatacaattgttttg
tcattgagagtgtatatcaacaattccatgtttcgtaagcaccaccaggcctcactcgat
gctggaagcagttatggtgaggattcagtttttcatcctattccaaatttgttccggttg
cttggcatgactccttttatgaaggcagaatttactcccagtgatttgtacacaagaaag
agacctttggaatcaaaggtcctttctggtatttctccctcattattacaagccaacaag
tttaagaatcagtctcgaaatgaaagcaaagttgaaaatgaggagcttatttcagatgct
gatcttgacaacattgttggtgttggaaacagctctgagttagaggagatggacccccct
agtactcttcagtgtgaacttcgcccctaccagaagcaggcccttcattggatgacacac
cgggagaaggggcaatcaatggatgaggcagcaagaatccttcacccatgttgggaggca
tatcgtctagcagatgagagggagcccgtggtctatttgaattcattttctggtgatgct
accacagaatttccaagcacacttgaagtgtccagaggaggaattctggcagatgctatg
ggccttggcaagaccattatgaccttagccctcctcctcactcattcagaaagaggtaca
ccatcaggtagtcagtcccaaagtcagcattctggtgaggctattgaaggcgttgatttt
tcagatcaatcaccgaatctcccaaagaaagcaccaaaattttcggtcttggataaggtg
gtgacgaaaaatcctacacttcctctaggtggcactctgattatatgtcctatgactctt
ttaggccagtggaaggcggagattgaaactcatgcaaaaccggggtctctgtctttgtat
gttcattatggaccaggtagacataaggatgcaaatattttagctgagagtgacgttgta
attactacctatggagtacttacctctgacttttcatcagagtttacattacagaattct
gaaaacaatggaggagttcactctgttcagtggttaagagttgttcttgatgaggcacat
atcattaaatcatataaaagccaaatttccatcgctgctgctgctcttgttgctgattgc
cgctggtgtctcacgggcactcctatccagaacaaccttggggacatatatagtcttctt
cggtttttgagggtggaaccatggggaacttgggcatggtggaacaaacttgtccaaaaa
ccatttgaggaaggcgatgagagagggctaaagttggttcaatccattctaaagccaatc
atgttaaggagaacaaagtctagcactgatagagaaggaaggcctattctagttctccct
cctgctgatattcaggtgatttactgtgaactcacagatgttgagaaagacttttatgag
gccctttttaaaagatccaaggtgaagtttgataaatttgttgagcaaggacgggttctt
cacaattatgcttcgatattggagttacttttgcgtcttcgccaatgttgtgatcatcca
tatcttgtgatgagccgaggtgatacccaagaatatgcagatctgaataagctagctaag
cgtttcctgaaaggcagccataatgaactagaaggtgaagccaaagatatgccttcacgg
gcatacgtacaggaggttgtggaggagctacgcaagggggaacagggagaatgtccaata
tgtctggaagtatttgaagatgctgtattgacaccgtgtgctcaccgtttatgccgtgag
tgtctcctggcaagttggagaactcctacttctgggttatgtcctgtttgcaggaaagcc
atcaataggcaagaccttattacagccccgactgatagtcgtttcacggttgatgttgag
aaagattgggtggaatcatctaaaatcgttgttcttttgcaagaacttgaaaatcttcgc
aaatcaggctccaagagcattatatttagccagtggactgcctttctggacctcttgcag
attcctctttctcggaacaatattacatttcttcgcttggatggaactcttactcagcag
cggcgtgaaaaagtgttaaaacagttttcagaagataccaatgtcctggtgttgctaatg
tcactaaaggcgggtggggttggaataaatctgacagcagcttccaatgcttttgtcttg
gatccatggtggaatccagctgtggaggagcaagctgtcatgcgcattcatcgtattgga
caaaccaagagagtgatgattaaacggttcattgtgaagggaacggttgaagagagaatg
gaagcagtgcaagcacgtaagcagcggatgattgcgggtgccttgtcagatcaagaagtt
aaaagtgctcgcattcaggaactaaagatgctttttacttaa

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