Pistacia vera (pistachio): 116142179
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Entry
116142179 CDS
T07386
Name
(RefSeq) serine/arginine-rich splicing factor RS31-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116142179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116142179
Spliceosome [BR:
pvy03041
]
Common components
Common spliceosomal components
SR proteins
116142179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RNA_bind
Nup35_RRM_2
SET_assoc
RBD_RDR6
RRM_5
RRM_Nup35
RRM_fung
Motif
Other DBs
NCBI-GeneID:
116142179
NCBI-ProteinID:
XP_031283478
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
MSRPIFVGNFEYETRQSELERVFSKHGRVERVDMKSGFAFVYFEDDRDAADAIRGLDNQP
FGYNRRRLSVEWARGERGRHREGSRSMANQRPTKTLFVINFDPIRTKERDIKRHFEPYGN
VLHVRIRRNFAFVQFETQEDATKALDATNRSKLLDRVISVEYALKDDSERDDRYDSPRRG
SYGRRGDSPYGRSPSPAYRRRPSPDYGRARSPVYDRYNGTVYDRRRSPDYGRNRSPVYYK
RRSPDYGRNRSPEYDRYRSRSPVRRSRT
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagacccattttcgttggaaacttcgagtacgagactcgccaatctgagctagag
cgcgtcttctccaaacacggaagggtggagcgagttgacatgaaatctggctttgctttt
gtttattttgaggatgatcgagatgctgcagatgccatccgtggacttgataatcaacca
tttggttacaaccgacggaggctgtcggttgagtgggctaggggtgagcgtggtcggcat
cgtgaagggtctaggtcaatggcaaatcagaggcccactaaaaccttgtttgtgattaac
tttgatcctattcgaacaaaggagcgggatataaaaagacacttcgagccctatggaaat
gtccttcatgttcggattcgacgaaactttgcatttgtgcagtttgagacacaagaagat
gcaaccaaggcccttgatgctacaaatagaagtaagttattggacagggttatttctgtt
gagtatgctttaaaagatgatagtgagagggatgacagatatgatagccctagaagaggt
agttatggtaggcgtggggatagtccatatgggagatcaccaagtcctgcttatcgtagg
agaccaagtccagattatggccgagcccgcagcccagtttatgatcggtacaatgggaca
gtgtatgacaggcgcagaagtcctgattatgggaggaacaggagtccagtgtattacaag
cggagaagtcctgattatgggcggaataggagccctgagtatgacagataccgcagccga
tcaccagttagaaggtcaagaacgtga
DBGET
integrated database retrieval system
