KEGG   Pistacia vera (pistachio): 116142262
Entry
116142262         CDS       T07386                                 
Name
(RefSeq) histone deacetylase 6-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03082  ATP-dependent chromatin remodeling
pvy03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116142262
   03083 Polycomb repressive complex
    116142262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvy03036]
    116142262
Enzymes [BR:pvy01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     116142262
Chromosome and associated proteins [BR:pvy03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     116142262
   HDAC complexes
    Sin3A-HDAC complex
     116142262
    BRAF-HDAC complex
     116142262
    REST complex
     116142262
    SHIP complex
     116142262
    MiDAC complex
     116142262
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     116142262
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    116142262
  Chromatin remodeling factors
   NuRD complex
    116142262
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 116142262
NCBI-ProteinID: XP_031283565
LinkDB
Position
Unknown
AA seq 458 aa
MEEGASLPSGPDGKKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYALHRRMEV
NRPFPAGPSDIRRFHSDEYVEFLASVSPESSGDPSFSRHLKRFNVGEDCPVFDGLFGFCQ
ASSGGSIGAAVKLNRGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILEMLKVHKRVL
YVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGQGKNYALNVPLNDG
LDDESFRGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLHFLRSF
NVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPCNME
NLNTAKDMERIRATLLEQLSRLSHAPSVPFQTTPPITEVPEEPEEDMEQRPKPRIWSGED
YASDHEEDEKPPQKMVKVEMRDGPDDMEEDKSGHHPSC
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggaggagggtgcgtcgctgccatcaggtcccgacggcaagaagcgtcgtgtcagctac
ttctatgaacctacgatcggcgactattactacggccagggccacccaatgaagccacac
agaattcgcatggcccacaatctcatcgtccactacgctctccaccgtcggatggaggtc
aaccgtcctttccctgccggaccctctgacatccgcagattccacagtgacgaatatgtt
gaattcttggcctccgtctcacccgaatcttccggtgacccgtcgttttcgagacacttg
aaacggttcaatgttggagaagattgtcccgtgtttgatggcctttttgggttctgccag
gcctcttcgggcggctccattggagctgctgtcaagttgaatagaggtgatgctgatatt
gctttgaattgggccggtggccttcatcatgctaagaagagtgaagcctctgggttttgt
tatgttaatgatattgttcttggcattctcgagatgcttaaggttcacaagcgtgtgtta
tatgttgatattgatgttcaccatggagacggagttgaggaggcattttacaccactgac
agagtgatgacagtttctttccataaatttggggatttctttcctgggactgggcatatc
aaggatgttggggcggggcaaggtaaaaattatgccctgaatgtcccactgaatgatggc
ttggatgatgaaagtttccgtggtctgtttcggcctatcatccaaaaggtcatggaagtg
tatcaacctgatgcagttgttcttcagtgtggggcagattcactgtctggtgataggttg
ggctgctttaacttgtcagtaaaaggccatgctgattgccttcacttccttagatccttc
aatgttcctctgatggtcttgggtggaggaggatatactatccggaatgttgctcgatgt
tggtgctatgagacagcagttgcagttggtgttgaacctgataataaattgccttacaat
gaatattatgagtattttggaccagattacactcttcacgttgaaccgtgcaacatggag
aacctaaacacagccaaagacatggagagaataagggccacactacttgagcaactttct
aggttatctcatgctcccagtgtaccttttcagacaacaccacccattacagaagttcca
gaagagcccgaagaggacatggagcaaagaccaaaacctcgcatttggagtggtgaggat
tatgcgtcggatcatgaggaggatgagaagcctccacaaaaaatggtaaaagttgagatg
agggatggtccggatgacatggaagaagataaatcgggacatcatccatcatgttga

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