Pistacia vera (pistachio): 116142536
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Entry
116142536 CDS
T07386
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvy03000
]
116142536
03036 Chromosome and associated proteins [BR:
pvy03036
]
116142536
Transcription factors [BR:
pvy03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116142536
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116142536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
YlbD_coat
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
116142536
NCBI-ProteinID:
XP_031283826
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MEDKHEEVEDIESASGDSFIADSDDDAPSTSGQDDELHIEEHLTEEEIEELVAEFLEVES
KAAEAQEALEPESLAKVEGEVREELAQNLHKDALEVAVEDEMTAYREQWEAVLDELETES
AHLLEQLDGAGIELPSLYKWIENQAPNGCCTEAWKKRAHWVGSQVPSEMNKSITDAEEYL
QTQRPVRRRHGKLLEEGASGFLQKKLANDDSKEAVTETRDLDWSSVNKIFSGDVSDECKF
GGKHWASVYLASNPQQAAAMGLKFPGVDEVEEIEDIDDNSNDPFVADAIANERELVLSEE
QRKNFRKVKEEDDANIDRKLQLHLKRRRHRKRSKQGATQKEVFSVDGVVESNSDEARPFV
DSSNCLPSNKSQEDEEGMPDKNNEVKSSGTSDNFDKARPISNGTSSMSDSALPDSTELRG
SKRSNESEEPNDDIKRIRPIIIDCDEEANVMNDKSVCIKLEDQSVLHENANVSVTADSLP
SQISYEKFFCTACQKVASEVHSHPLMKVIICKDCKSLLEQKMHLKQDADCSECFCGWCGR
SNDLINCKSCKVLFCTTCVQRNISEACLSEIQASSWQCCCCSPSLLQRLTLEFEKAIGSG
DLTVSSSESDSESSDADNNLTVGRKRKQKKKIRRILDDAELGEETKRKIAIEKERQERLK
SLQVQFSATSNMTTAASFERDLPAAASTEVLGDAITGYIVNVVREKGEEAVRIPPSISAK
LKAHQVVGIRFIWENIVQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAIRSIDLG
LRTALIVTPVNVLHNWRQEFMKWRPTEVKPLRVFMLEDVSRERRAELLAKWRAKGGVFII
GYAAFRNLSFGKHVKDRQMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQR
RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQ
RSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKRFLDLHGFANDKVS
NEKIRKSFFAGYQALAQIWNHPGILQLKKEDRGYPSREDAEDSSSDENLDYNVVIGEKPR
NTNDVLQGKNDDGFFQQDWWKDLLREHTYKELDYSGKMVLLLDILTSCSDIGDKVLVFSQ
SIPTLDLIELYLSKLTRSGKQGKFWKKGKDWYRLDGRTESSERQKLVERFNEPFNKRVKC
TLISTRAGSLGINLHAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMAHGTME
EKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLPEVCQENGQENSQ
TTTCKIGNSLKHKLPLSHGSCLSDKLMESLLGKHHPRWIANYHEHETLLQENEEERLSKE
EQDLAWEVYRRSLEWEEVQRVPLDESGPERKPAVTSNVVPPAPGTSDTTMQPRGILRSRV
VLRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEIRWEDLNRDGKPAR
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaacatgaggaagtggaggatatcgagagtgcttctggtgactctttcatt
gctgactcagatgatgatgcaccatcaacttccggacaagatgatgaattgcatattgag
gaacatttgactgaggaagaaatagaagagctagttgctgagtttttggaagttgagagt
aaggctgcagaggctcaggaagcacttgaacccgagtcccttgccaaagtggaaggtgag
gttagagaggagttggcacaaaatctccataaggatgctttggaggtggccgttgaagat
gaaatgactgcctatagagagcagtgggaagcagtgctggacgaactcgaaacagagagt
gctcacttgttggaacaacttgatggagctggtattgagttaccaagcctatataagtgg
atcgaaaatcaggctcctaatggttgctgcactgaagcttggaaaaaaagagcacactgg
gtaggatctcaggtgcctagtgaaatgaacaagtcgataactgatgccgaggagtatctt
caaacccaaaggcctgtaagaaggcgacatggtaaactattggaggagggtgccagtgga
tttttacagaaaaaacttgctaatgatgatagcaaggaggctgtaacagaaactagagac
ctcgactggagctctgtgaacaaaatattttctggtgatgtttctgatgagtgtaaattt
ggtggcaagcattgggcttctgtgtacttggccagtaatccacagcaagctgctgcaatg
ggactcaaatttcctggagttgatgaggtggaggagatcgaagacattgacgacaattcc
aatgatccatttgttgcagatgccatagctaatgaaagagaattggttctttctgaagag
caaagaaaaaattttagaaaggtcaaagaggaagatgatgcaaatatcgatcgcaagctt
caactacatttgaaacgaaggcggcatcgaaaaagatcaaaacagggagctactcagaaa
gaagttttctctgttgatggtgtggttgaaagtaattcagatgaggcccggccttttgtt
gattcttctaattgtcttccaagcaataaatctcaagaagatgaggaaggcatgcctgac
aaaaacaatgaggttaaaagttccggaacttcagataattttgacaaggcaaggccaatt
agtaatggcacttcttcaatgtcggattctgctttgcctgattccactgaattaagaggg
tccaagcgttccaatgagagtgaggagccaaatgatgatataaaacggattcggcctatt
atcatagattgtgatgaagaagctaatgtgatgaatgataaatctgtttgcatcaaattg
gaagatcaatctgtcttgcatgaaaatgctaacgtttctgtcactgctgactctcttcct
tcccagatttcgtatgaaaaattcttttgtactgcctgtcaaaaggtggcctccgaagtt
cactcgcatccgcttatgaaagtaatcatttgcaaggattgtaaaagcctattggaacag
aagatgcatttgaagcaggatgctgactgctctgagtgtttctgtggatggtgtggacga
agcaatgatttaataaattgtaagtcgtgcaaggtattgttctgtaccacttgtgtgcag
aggaatattagtgaagcatgcttgtctgagattcaggcctcttcctggcaatgttgttgc
tgctctccaagtctcctgcaaagattgaccttagaatttgagaaagccattggttctgga
gaccttacggtttctagctctgaaagtgactcagagagttcagatgccgacaataatctc
acagtaggccgtaagagaaagcaaaagaagaaaattcggaggattctagatgatgctgaa
ttaggagaagaaaccaaaagaaaaattgcaattgaaaaggagcgccaagagcgtctaaaa
tctttgcaagtgcagttttctgccacatctaatatgacaaccgcggcaagttttgaacgg
gacttgcctgctgctgctagtactgaagtgcttggtgatgctattactgggtatatagtg
aatgttgtgcgggagaaaggtgaagaagctgtgagaattccaccaagcatatcagctaaa
ctgaaagctcatcaggtagtagggataagatttatttgggaaaatattgtacagtcaatc
agaaaggtgaagtctggagataaagggcttggttgcattctggctcatacaatgggcctt
gggaaaacattccaggtcatagccttcttgtacacggcaatcagaagtattgacttggga
ttaagaactgcacttattgtcacccctgtaaatgtacttcataattggaggcaggaattc
atgaagtggaggcctacagaggtgaaacctctccgtgtcttcatgttggaagatgtatca
agggagagaagagcagaattacttgcaaagtggagggccaagggtggtgtatttataatt
ggctatgctgctttccggaacttgtcctttggaaagcatgtgaaggataggcagatggct
agagaaatttgtcatgccttgcaggatggacctgatatacttgtttgtgatgaggcccat
atgattaagaacaccagggctgacacaactcaagccttgaaacaagtgaaatgccaaaga
aggattgccttgactggatcacctcttcaaaacaatctcatggaatattattgcatggtt
gattttgtaagggaaggtttccttggtagcagtcatgagtttaggaaccgctttcagaat
cctatcgaaaatggtcagcatactaattcaacatctgaagatgttaaaattatgaatcag
aggtctcatatcctctatgaacaattaaaaggatttgtccagagaatggacatgaatgtg
gtgaagaaggacttgccaccaaaaactgtctttgtaataacagtgaagctctctccacta
cagaggaaactatacaagagatttcttgatttgcatgggtttgcaaatgacaaagtctct
aatgaaaagataaggaagagcttttttgctgggtatcaggccttagctcagatatggaac
catcctggcatcttacaattgaaaaaagaagataggggctatccgagccgggaggatgct
gaggacagttccagcgatgaaaacctagattataatgtggtgataggagagaagccaagg
aatacaaatgatgttctgcagggaaagaacgacgatggcttttttcagcaggattggtgg
aaagatcttctgcgtgaacatacttataaagagctcgactacagtggcaaaatggttttg
ctgcttgatattctaacctcgtgttctgacataggtgataaagtattggtttttagccag
agtataccaacattagacctcatagagctgtatctttcaaagttaactcgatcaggcaag
caagggaagttttggaaaaagggaaaggattggtataggctagatgggagaacagagagt
tctgaaaggcaaaagttggtagagagatttaatgagcccttcaataaaagggtgaagtgt
acattaatttcaactagagctggatctctggggataaatcttcatgctgccaaccgggta
attattgttgatggttcctggaatccgacatatgatcttcaggccatatttcgtgcttgg
aggtacgggcaaaaaaagccagtttttgcttaccgattgatggcacatggaaccatggag
gagaagatatacaaacgtcaggtcacgaaggaggggcttgccgcaagggtggttgacaga
caacaagtacataggactatctctaaagaagaaatgttacatctctttgaatttggtgat
gatgaaaaccctgatcctctacctgaagtctgtcaagaaaatggacaagaaaacagtcaa
actacaacttgcaaaataggaaattctctgaagcataagttgcctctttctcatggaagc
tgcctttctgacaagttgatggaaagtttacttggcaagcatcatccaaggtggattgcc
aattaccatgaacatgagacccttttgcaagagaatgaagaggaaaggctttcaaaggag
gaacaagacttggcctgggaagtgtacaggagatcattagaatgggaggaagtacaacgt
gtaccacttgatgaatcaggaccagagcgaaaacctgctgtcacgtcaaatgtggttcct
cctgcaccagggaccagtgacaccacaatgcaacccagaggcattctgaggagtcgtgtg
gtgctacggaaatgcactaatctttctcatttgcttactcttagaagtcagggcacaaaa
gttggttgcagcacagtatgtggagaatgtgctcaggaaatacggtgggaggatctaaat
agggatggcaaaccagctaggtga
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integrated database retrieval system
