Pistacia vera (pistachio): 116142558
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Entry
116142558 CDS
T07386
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116142558
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvy01009
]
116142558
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116142558
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116142558
03041 Spliceosome [BR:
pvy03041
]
116142558
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
116142558
Protein phosphatases and associated proteins [BR:
pvy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
116142558
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116142558
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116142558
Spliceosome [BR:
pvy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116142558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
116142558
NCBI-ProteinID:
XP_031283859
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MEQGHIDDIINRLLQLRDGSGKHIPLCEFEIRQLCMVSQKIFLKQPSLLELEAPIKICGD
IHGQYPDLLRLFDLGGYPPNTNYLFLGDYEDRGKQNLETICLLLAYKIKYPKKFFLLRGN
HETASISKDYGFRKECIRRFNSRLWDTFIVCFDCLPVAALIDEKILCMHGGISEELDDLD
QIREIQRPTDVPYSGLVCDLLWSDPSQDFQGWRFNNGRGAGQTFGSDQVTEFLQKHDLDL
ICRAHEVVEDGYEFFASKQLVTIFSAPNYMGECNNAGAILNVDENLMCSLQILEPDQLSS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaggacatattgatgatataattaatagattattgcagcttcgggatggatcc
ggaaagcatatcccattgtgcgagttcgagatccggcaactgtgtatggtgtctcaaaag
attttcttgaaacagcccagtttgttagagcttgaagcacccatcaagatttgtggtgac
atccatggtcaatatcctgatctcttgagactttttgatcttggtggttaccctccaaat
accaactacttatttttgggcgattatgaggaccgtggcaagcaaaacctggaaacaata
tgtcttctccttgcatataaaattaagtatcctaaaaaatttttcctcttgagaggaaac
cacgaaactgcttctataagcaaagactatggttttagaaaagagtgtatcagaagattc
aattctcgactatgggacacattcatagtttgttttgactgtctaccagttgcagcctta
attgatgagaaaatcctctgcatgcatggaggcatatctgaagagttggatgatttggat
caaattagagaaatacaacgtccgactgatgtaccatattcaggtttggtctgtgatctt
ctgtggtcagatcccagtcaagattttcaaggttggaggtttaataatggcaggggagcc
gggcaaacgtttggttcagatcaagtgacagaatttctgcagaaacatgatctagatctc
atttgtcgagctcacgaggttgtggaggatggatacgagttctttgccagcaagcagctt
gtaactatattttcggcacccaattatatgggagagtgcaacaatgctggtgccatctta
aatgtcgatgaaaatctgatgtgctctctacaaatactagagcctgatcagctcagctcg
taa
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