Pistacia vera (pistachio): 116142619
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Entry
116142619 CDS
T07386
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
116142619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvy04131
]
116142619
03029 Mitochondrial biogenesis [BR:
pvy03029
]
116142619
Membrane trafficking [BR:
pvy04131
]
Autophagy
Autophagosome formation proteins
ULK complex
116142619
Atg1 complex
116142619
Mitochondrial biogenesis [BR:
pvy03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116142619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
116142619
NCBI-ProteinID:
XP_031283908
LinkDB
All DBs
Position
Unknown
AA seq
608 aa
AA seq
DB search
MDFQTNLQSESGKLENIISQFLLKILHVILDSRVPSLHSRDQSSVYRVRKSDKWFNLVLG
DRPSALDNLNFWHRNVMDPMIIDIILVHKDPNPIGSLSSSCNETVIERWVVQYESTKMVH
HPINETSSSYKKTYKKSIVLLRSLYTHMRLLPAYRIFRQLRSSSPNFNFDIIYKVSSFSN
PFSRADEESMCEYAFVPVEALPGRLCVSVTYRSTLIDFNLEPLVSLPPKIITDYVGSPLP
DPMRSFPSSEKGVRATSFPLRGVRPPSSAPLERPHSWSSGFQKGAPFLQSQPIGGSPPAF
RPSPPSYDFSSSPSDNYSHRVQNFRPPAHYRSPSYDEYQLSPPFSPYACPAPSTYLFGGN
PIHARKSSETAPVSIPHPIRSSRYLSPNFSDPNRHSLPPISPRSTKHDPSSQESTSANRS
YRRTESVKAGELHGAVNHSSVHKMVRDNKDDSGRFSGLLYSSGSPRPGLSGSSSRLSFQD
DLDDCDFSCPFDVDDIDTSDSTASQNLDAKATSELSSQSHPLGRKSQDAAVGVLVHMLRT
APPLRQDSSIYSSHSLRPEDPEGGVGTASGFFMPRKTADALEELRSYREMKDLLLSKSGT
RVLSREEA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggattttcaaacgaatttgcaatcggaatctgggaaattggaaaatattatatcccag
tttctgctcaagattcttcatgtgatactcgactcacgtgttccttctcttcactcacgt
gaccaatcttcggtttatcgtgtgaggaagagtgataaatggttcaatttagtgctagga
gaccgcccttctgctttagataatttgaatttttggcacagaaatgtaatggatcctatg
attattgatataattcttgttcataaagatcccaatccaattgggtcgttgtcatcgtct
tgtaatgagacagtgattgagaggtgggttgttcaatatgagtctacaaaaatggtgcat
catccaatcaatgaaacttcttcgtcttataaaaagacttacaagaagtccattgtactg
ttgagatcactttatacccatatgaggcttctccctgcttataggatctttcgccagctt
aggtcttcgagtccgaactttaattttgatatcatttataaggtttcttcgtttagcaat
ccgttttcgcgggctgatgaggaatccatgtgtgaatatgcttttgttcccgttgaggcg
cttcctggtcgcctttgtgtgtctgtgacttaccgttcaacgctaattgattttaacctt
gagcctttagtgtcattgccccctaagattataacggattatgttggtagtcctttacct
gatccaatgaggtcttttccctcttcggagaagggtgttcgtgctacatcttttccgttg
agaggagttaggcctccatcttctgcgccattggaacgtccgcatagttggtcgagtgga
tttcaaaagggagctccatttctgcagagtcaaccaatcggtggttctccacctgcattt
cgcccatctcctccgtcatatgatttttcatcttcacctagtgataattatagtcataga
gttcaaaattttagaccaccagctcattataggtctcccagttatgatgagtatcagctt
tcgcctcctttttcgccatatgcttgccccgcgccctctacatatttgtttggtggtaat
cctattcatgctcgtaaaagttctgagactgcccctgttagtatcccgcatccaattaga
agttctagatacctttctccaaacttttctgatccaaatagacattctcttccaccaatc
tctcctagaagtacaaagcatgatccttcatcacaagagtctacatctgcaaaccgctca
tacaggagaacagaatctgtaaaagctggagaattgcatggtgcagtgaatcattcttct
gtccacaagatggtcagagataataaagatgattctggccggttctcaggattgttatat
tctagtggctcaccacgtcctggattatccggaagctccagtagattatcttttcaggat
gacttggatgattgtgacttctcttgtccctttgatgttgatgatattgatacatcagat
tccacagccagtcagaatcttgatgcaaaagcaacttcagaattgtcatcccaatcacat
ccactgggtagaaaatcacaagatgctgctgttggtgttctcgtgcacatgctgaggaca
gccccgcctctgcgtcaagattctagtatttactcatcccactcattaaggccagaagat
cctgagggaggggttggcacagcttctggtttctttatgcctcgaaaaacagcagatgcc
ctggaagagcttaggagttatagagaaatgaaagacctgctactctccaagagcgggact
cgggtgttaagcagggaagaggcatga
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