Pistacia vera (pistachio): 116142949
Help
Entry
116142949 CDS
T07386
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
116142949
Enzymes [BR:
pvy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
116142949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Dioxygenase_C
Motif
Other DBs
NCBI-GeneID:
116142949
NCBI-ProteinID:
XP_031284225
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MAKKPVKLINEGSSVILDNGLVRLTVSKPQGYVTSIKYGGMDNLLDRELSESSRGYWDIN
WSLPGGQDRYKLLSGAEYSLIHMSNDSLEVSFKSSYNPSSPGGNKLPLTVDIRYVLRSGV
SGFHCYSIYERPPGCPAFDLAQTRMVFKLRRDRFHYMAITDEKQRVMPMPEDLLPGRGKQ
LIVPESVLLVNPINPDLKGEVDDKYQYSMDNKDGGVHGWISSRSPIIGFWVIFPSHEFRN
GGPTKQNLTVHTGPACLAMFHGTHYIGDDILAHFKEGETWRKVFGPFFVYLNSTPDASNA
HNLWVDAKKQRLLEEAAWPYDFVSSPYYLTVKERGSATGRLFVQDRFISTTLIPAKNAYI
GLSSARTEGAWQTESKDYQFWVQTDSNGDFTIKNVVPGVYGLHGWVPGFIGDYLDKALIT
ISTGSQPELGNLTYVPLRDGPTLWEIGFPDRTATGFFVPDVNPMYVNRLFVNSPEKYRQY
GLWDRYADIHPESDQVFTIGVNDSKKDWFFAHVDRRGPNNKYLPTTWTIKFNLASVISGI
YKVRLAIASATRSDLKVYVNYIDDGHLAFEEMNLGMDNTVCRHGIHGLYQLFSFDVSSVL
LIKGDNSMFLTQARGGDALCGVLYDYIRLEAPASSVKSKWLEEQR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaagccggtgaagttgatcaatgaaggatcctctgtcattctggacaatggt
ttggttcggctcacggtgtcgaaacctcaagggtatgtcaccagcatcaagtatggtgga
atggacaatcttttagatcgcgaattgagtgaatctagtagaggatattgggatatcaac
tggagtttgcctggtggccaggacagatataaattgctgagtggagctgaatatagtctc
attcatatgagtaatgatagtttagaagtttcattcaagagttcttacaatccatcatct
ccaggaggcaacaaattgccactcactgttgacataaggtatgtattgaggagtggagtt
tcagggttccactgttattcgatatatgagcgtcctccgggatgccctgcctttgatctt
gctcaaacaaggatggtgtttaagttgcggcgagaccggttccactacatggcaatcaca
gatgaaaaacaaagagtaatgccaatgccggaggacttacttcctggtagaggcaaacag
ctgattgttcctgaatcagttttgttagtaaatcccatcaatcctgatctcaaaggcgag
gttgatgataagtaccagtactcaatggacaataaagatggaggagttcatggatggata
agctctcgcagccccataatcgggttctgggttatctttcccagtcatgaatttcgaaat
ggtggccctactaaacaaaatctcactgttcatactggtccagcatgtttagcaatgttt
catggaacacattatattggagacgacatcttagctcattttaaggaaggagagacatgg
agaaaggtgtttggccccttttttgtgtacctcaattcaacacctgatgcgtcaaatgca
cacaacttatgggtagatgcaaaaaagcagaggttgcttgaagaggcagcttggccgtat
gattttgtatcatcgccctattatctaactgtaaaagagcgcggttcagctaccgggaga
ttgtttgtccaggacagatttatttccactactttgattccggctaaaaatgcatacatt
ggactatcatctgcaagaactgaaggagcatggcaaacggaaagcaaggattatcagttc
tgggtgcaaacagactctaatggagatttcaccatcaagaatgttgtccctggagtctat
ggactccatggttgggttccaggtttcattggggattatcttgacaaagcactaatcacc
atctctacagggtcacaaccagaacttggaaacttaacctatgttcccctcagagatggt
ccaactctttgggagatcggcttccctgatcgtactgccactggtttctttgttcctgat
gtgaatccaatgtatgtcaacaggctattcgttaacagccccgagaagtacagacaatat
ggcttgtgggacagatatgctgatattcatcctgaatccgatcaagttttcactataggt
gtcaatgattcaaaaaaagactggttcttcgctcacgtagacagaagagggccaaataac
aagtatctcccaacaacatggacaatcaagtttaatctcgcttcagtaatcagtggaatt
tacaaagtgagattggccattgcatcagcaacccgttctgatctcaaggtgtatgttaac
tacatagatgacggtcacctggcatttgaagagatgaatctagggatggataacacagtt
tgtagacatggaattcatggactgtaccaactcttcagctttgatgtttcctcagtattg
ctgatcaagggagataactcaatgtttctcacacaggctaggggtggagatgcactttgt
ggagtactctatgactacataagactggaagctcctgcatcctcagtcaaatcaaagtgg
ctagaagaacaaaggtag
DBGET
integrated database retrieval system
