KEGG   Pistacia vera (pistachio): 116143038
Entry
116143038         CDS       T07386                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    116143038
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116143038
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     116143038
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_RIG_2nd RAWUL Beta-prop_DCAF4 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_WDR75_2nd ANAPC4_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th VWA_3_C PAN2_N
Other DBs
NCBI-GeneID: 116143038
NCBI-ProteinID: XP_031284311
LinkDB
Position
Unknown
AA seq 768 aa
MHGGVAMHRVGSAGNNSNSTRPRKEKRLTYVLNDADDTKHCAGINCLAVSKSSASDGCNY
LFTGSRDGTLKRWTLAEDAASCSATLESHVDWVNDAVITGDNTLVSCSSDTTLKTWNCLS
GGTCTRTLRQHSDYVTCLAAAEKNSNLVASGGLGGEVFVWDIEAAVTPLSKPSDVMEEDC
SNGVNGSGNSLPITGLRTISSSNSISAHTIQSHGYVPTAVKGHKESVYALAMNDSGTLLV
SGGTEKVVRVWDPRTGLKTMKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRC
VHSYAVHTDSVWALASTPTFNHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLALHDD
NIWAATTDSSVHRWPAEGRNPQKVFQRGGSFLAGNLSFSRARVSLEGSTPVPVYKEPTFT
IPGTPGIVQHEILNNRRHVLTKDTAGLVKLWEITRGVVVEDYGKVSFEEKKEQLFEMVSI
PAWFTVDTRLGSLSVHLDTPQCFSAEMYSADLQIAGKPEDDKVNLARETLKGLLAHWLAK
RRQKVGSQASANGDVLSGKDITTRGLTHSRIEVDGNVENDSMVYPPFEFSTVSPPSIITE
GSQGGPWRKKITDLDGTEDEKDFPYWCLDCVLNNRLPPRENTKCSFYLHPCEGSAVQILT
QGKLSAPRILRIHKVVNYVVEKMVFDKPSDGVNSDGTFPGLAGGPLQHSAVGDSFRSGLK
SWQKLKPSIEILCNNQVLSPEMSLATVRAYVWKKPEDLVLNYRVVQGK
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgcacggaggagttgcaatgcaccgggtgggtagtgcgggtaacaactccaattctact
cggccccgtaaagagaagaggttgacatatgtgttaaatgatgctgatgacacgaagcat
tgtgctggcataaactgtttggctgtatccaagtcatcggcatctgatggctgcaattac
ctattcactgggagccgagatggcacactaaagagatggacactagctgaagatgctgct
agctgctctgctactttggagtcgcatgttgactgggttaatgatgctgtaattaccggt
gataatacacttgtttcctgctcttcagataccactctcaagacttggaattgcttgtct
ggtggaacttgtaccaggactctgcgtcaacactccgactatgttacttgtcttgcagca
gcagaaaaaaatagcaatcttgttgcttctggtggtcttggtggggaggttttcgtatgg
gatattgaagccgcagttactccactttcaaaaccaagcgatgtgatggaggaagattgt
tcaaatggtgtcaatggttctgggaattctttaccaataacaggtttacgaactattagc
tctagcaacagcatctctgcgcacacaattcagtcacatggatatgtacctactgctgtc
aaaggccataaggagtctgtctatgcattggctatgaatgatagtggaacccttcttgtc
tctggtggaactgagaaggttgttcgtgtttgggacccaagaactggtttgaagactatg
aagctaagagggcatacagataacattagagctctgcttttagattctactggcaggttt
tgcttatcaggatcctctgactctatgatcaggttatgggatcttggtcaacagcgatgt
gtgcattcatacgctgtacatacagattctgtttgggcacttgcaagcacccccacattt
aatcatgtttatagtggtgggagagacctctctttatacttgacagacttggcgacaaga
gagtctctcctgctttgcactggggaacaccccattctgcaactggcattgcatgatgac
aatatatgggctgcaacgactgattcttcagttcataggtggccagctgaaggacgtaat
cctcaaaaggtctttcaaagaggtggttcattcttagctggaaatttgtccttttcaagg
gcaagggtttccttggaaggatctacccctgttcctgtttataaagaaccgacctttaca
attcctggaaccccaggaatagtgcagcatgaaattttaaataatcgaaggcatgtcttg
actaaggatactgctggtttggtaaagctatgggagatcacccgaggtgttgtggttgag
gactatggaaaggtatcgtttgaggagaaaaaggaacaattatttgagatggtaagcatt
cctgcatggttcactgtggatactagacttggaagtttgtctgttcatttggacacgcca
caatgcttctctgcggagatgtattcagcagaccttcaaattgctggaaaacctgaggat
gataaggttaatctggctcgggaaacgctcaaaggtttattggctcattggctggccaaa
agaaggcagaaagtgggttcacaagcttctgctaatggggatgttttgtctgggaaggat
attactactagaggccttacccattcaagaattgaggtggatggtaatgttgaaaatgac
tccatggtttatcctccatttgaattttcaactgtttccccgccatcaataattactgag
ggttctcaaggaggtccatggagaaagaaaattaccgacttagatggaactgaagatgaa
aaggactttccttattggtgtcttgattgtgtattgaataatcgcttacctcctagagaa
aataccaagtgtagcttttatctgcatccatgtgaaggttcagctgtccagatcctgaca
caggggaaattaagtgcacctcgaatattgagaatacacaaggttgttaattatgtcgtg
gagaagatggtttttgacaaaccatcagatggtgtaaattctgatggaacatttcctggt
cttgctggaggcccattacagcattcggcagtgggagattcattccgatctggtttgaag
tcatggcaaaaacttaaaccttcgatagagatcttgtgcaataatcaggtattatcccca
gagatgagtttagctactgtgcgggcatatgtatggaagaaacctgaggacttggttctt
aattacagagttgtccagggaaagtga

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