Pistacia vera (pistachio): 116143305
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Entry
116143305 CDS
T07386
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116143305
Spliceosome [BR:
pvy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116143305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR
PPR_2
PPR_long
PPR_3
PPR_1
ARM_TT21_N
ARMT1-like_dom
Motif
Other DBs
NCBI-GeneID:
116143305
NCBI-ProteinID:
XP_031284625
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MLSTNPFNPTQALTSPVRTSLSLLRSLPFSLHYHRHHLLRLPTAKPRYLSRSFAAASPHS
TFVEHLSTSEETSEEDDALGYFNESNDIHNKWSLNFDVGSEMRHLGGSVVEVKELEELPE
QWRRAKLAWLCKELPAHKAGTLVRILNAQKKWLRQDDATYVAVHCMRIRENETGFRVYKW
MMQQHWYQYDFALATKLADYMGKERKFSKCREIFDDIINQGRVPCESTFHILVVAYLSAP
VQGSLEEACSIYNRMIQLGGYQPRLSLHNSLFRALVSKPGGLSKHYLKQAEFVFHNLNTS
GLEIQKFIYGGLIWLHSYQDTIDKERIESLREEMRQAGIEEGKEVLLSVLRVCSKEGDVE
EAERIWVKLVECNIDIPTQAFVYKMEAYAKVGEFMKSLDIFREMKEHLGSASVPAYHKII
EVLCKAQETELAESLMKEFEQSGMKSLMPSYIDLTNMYLNLGMHDRLDLTFSECLERCRP
NRSIYNIYLESLVEVGNLDKSEQIFNQMLKDEMIGVNARSCNTILRGYLSSGDYKKGEKI
YDLMCQKKYDIESTLMEKIDYVLSLTRKVVKKPVSIKLNKEQREILIGLLLGGLCIESDE
GRKNHMIRFEFNENSGVHSILRRHLYDQYHEWLHPSCKLSDDGREDIPYRFSSITHSYFG
FYADQFRPKGQPMIPKLIHRWLSPRVLAYWYMYGGHRTSVGDIILKLKGNSEGVEKVVRA
LKSQSLDCRVKKKGKVFWIGFMGSNSSWFWKLIEPYVLDDLKEGVLLKAGDDTSVYSGSD
SDGSVSDHSDEENL
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaaccaacccattcaacccgactcaagccctcacttcgcccgtgcgcacctct
ctttctctgctccgctcactccctttctccctccactaccaccgccaccacctccttcgt
ctccccaccgccaaaccccgttacttatctcgctcctttgctgccgcctctcctcacagt
actttcgtcgaacacctgtcgaccagcgaagaaacttcagaagaagacgacgcgttgggc
tacttcaatgaatctaacgatattcacaataaatggtctttgaattttgatgttggaagt
gaaatgaggcacttgggtgggtccgttgtggaggttaaggagctggaggagttgcctgag
cagtggagaagggccaagttggcttggttgtgtaaagaactgcctgctcataaagcgggg
acgcttgttaggattttgaacgctcagaagaagtggttgaggcaagacgatgccacttat
gtggctgttcattgcatgcggattcgtgagaatgaaactggcttcagggtgtacaaatgg
atgatgcagcaacattggtatcaatatgatttcgctcttgctaccaagctggcagattac
atgggtaaggaaagaaagttttccaagtgtagggagatatttgatgacataattaatcaa
ggacgtgtgccctgtgaatccacatttcatattttggttgttgcatatctgagtgcaccg
gttcaaggttccttggaggaagcatgcagcatctataatcgtatgattcaactgggaggt
taccaaccgcgtcttagtttgcataattctctcttcagagctcttgtgagcaaacctgga
ggcttgtcaaaacattaccttaaacaagctgagtttgtttttcacaatctgaacacatca
ggacttgagatacagaagtttatttatggtggattaatttggctacatagctatcaagac
accatagataaagaaaggatagaatcactaagggaagaaatgcggcaagcaggaattgag
gaaggcaaggaagtgctattgtctgtcttgagagtttgctcaaaggagggggatgtggag
gaagcagaaagaatttgggtcaaactagttgaatgtaacattgacatccccactcaagct
tttgtttataaaatggaagcttatgcgaaggttggggagttcatgaaatctttggacata
ttcagagagatgaaggagcatctaggttctgctagtgttccagcatatcataaaatcata
gaggtgttatgcaaagctcaggaaacagaacttgcagaatcccttatgaaagagtttgaa
cagagtggtatgaagtcacttatgccatcttacattgatctgacaaatatgtacctcaac
ttgggcatgcatgacagattagacttgaccttctcagagtgtcttgagagatgtcgacct
aatcgaagtatttacaacatttacttggaatctttggtggaagttggtaatctagacaaa
agtgagcagatttttaaccaaatgcttaaggatgaaatgattggtgttaacgctagatca
tgcaacaccattttacgtggatacctctcttctggagattataagaagggagaaaaaata
tatgatctgatgtgccagaagaagtatgatattgagtccacattgatggaaaaaattgac
tatgtgttgagcttgaccaggaaagttgttaagaaacctgtaagcataaagttgaataaa
gaacaacgagagattttaattggtttgcttttaggtggtttgtgcattgaatcagatgaa
gggaggaagaatcacatgatccggtttgagttcaatgagaattctggtgtgcattcaatt
ttgagaagacatttatatgaccagtaccacgagtggttacatccttcttgtaagctgagt
gatgatggtcgtgaggatataccatataggttttccagtatcacacactcatactttggt
ttttacgcagaccagtttcggccaaaaggtcagcccatgattcccaagctaatccatcgg
tggctatccccgcgtgttttggcatactggtatatgtatgggggacacagaacatcagta
ggggatatcatattaaagctgaagggaaacagcgagggtgttgagaaggttgtcagagct
ttgaaatctcaatctcttgattgcagagtaaagaagaaagggaaagtgttttggataggt
ttcatgggaagcaattcttcatggttttggaaactaatagaaccttatgttttggatgac
ttgaaagaaggtgtccttctcaaagcaggcgatgatacctcagtttatagtggatctgat
tctgatggtagtgtttccgatcacagtgatgaagaaaatttgtag
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