Pistacia vera (pistachio): 116143551
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Entry
116143551 CDS
T07386
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03440
Homologous recombination
pvy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116143551
03460 Fanconi anemia pathway
116143551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116143551
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116143551
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
HHH_8
DUF6429
Motif
Other DBs
NCBI-GeneID:
116143551
NCBI-ProteinID:
XP_031284861
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MRRVVCPENEGLASYMFQKWQEMAEKPKGLSENMDMTLFKAYNNVCNAKNHIKTLKDLSQ
LKGVGKWILKLVQGFFDAGSVSSEPEELTEKGKTSKATKNKGTKRYVPQRNSVAYALLIT
LHRGTANGNEFMRKQDLIDAAEASGLSRVPIMPEKGKGIPGQFGSSPRDWYSGWSCMKTL
ITKGLVVKSSCPAKYMLTQEGHDAARECLTRSGLTDSTDILLVERDSHLDACKAPDLEFA
HSDSSEEVTLQSVSLSWLNKSVDVPHASLERFTRMGYSKEQVLHAFDEEHKTSPLKEISS
LWPAVLCRLREDQVHGLHPNPQNLREDRHVASTTCAFTNSREDVVRSQSTQIDSACDGGN
MHNLSAESAPKIFTLKACSSFIDGLQTNMNVLSMPPLSFGERFEDAYEVILILDDREQFA
TQGSRSTRIIENICSQFKIRIEVRRLPVGDGIWIARHKQFDTEYVLDFIVERKKVDDLCS
SIRDNRYRDQKLRLLRCGLNKLIYLVEGDPNFSEASESIKTACFTTEILEGFDVQRTSGL
ADTLRKYGYLTQSITQFYKLELPDDQLKCAGICPTFNEFIKRCQDLDKMTVSDVFATQLM
QVMTVLVRRVDSCLFYCSVKTYEVELTICYGPLI
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgtagtgtgcccagaaaatgaagggttggcgagttacatgtttcagaagtgg
caagaaatggcggagaagccgaaaggattatccgagaatatggatatgactctgtttaag
gcgtataacaatgtgtgcaatgcaaagaatcacatcaagactcttaaggacttgtctcaa
ctcaagggtgtgggaaagtggattctgaagcttgtgcaaggattctttgatgctggttct
gttagttctgaaccagaagagttgactgaaaagggtaaaacaagtaaagcaactaagaat
aaaggaaccaaacgttatgtgccgcaaaggaattctgtggcatatgcattgttgattacc
ttacacaggggtactgcaaatgggaatgaatttatgcgtaaacaggatcttattgatgca
gctgaagcaagtggtctttctcgggtgccaattatgccagagaagggaaaggggattcct
gggcaatttggaagttctccgagggactggtatagtggatggagttgcatgaaaaccttg
ataaccaaaggactagttgtgaaatcgagttgcccagcaaagtacatgctgactcaggaa
gggcatgatgcagcacgtgaatgtctcacgagatctggtttgacagattccacggatatc
ttgctagttgaacgggattctcatctggatgcatgcaaggcaccagatctggagtttgct
cactcagattcttctgaagaggtgacattgcaatctgtcagtttgagttggctgaacaaa
tcagtagatgttccacatgcatctcttgagaggtttacacgcatggggtattccaaggaa
caagtgcttcatgcttttgatgaagaacacaaaacttccccactcaaggaaatctcatca
ctctggcctgcagttttatgtcgtctgcgagaagatcaagtgcatggtttgcatccgaat
cctcagaatttaagagaagatcgccatgtagcatcaacaacttgtgcattcacaaacagt
cgagaagatgttgttagaagtcaaagtactcagattgattctgcttgtgatggtggaaat
atgcacaatttatctgctgaatctgcgccaaaaatctttaccttgaaagcttgctcctct
tttatagatggtctgcaaacaaatatgaacgttttaagtatgccacctctgagttttggg
gaaagatttgaggatgcatatgaagtaatcttaatcttagatgatcgagagcaatttgcc
actcaagggtctcgttccacaagaataattgaaaatatttgctctcaattcaagatccga
atagaggttaggcggctaccagtaggtgacggaatctggattgctcgtcataaacaattt
gacactgagtatgttctggattttattgttgagaggaagaaagttgatgatttgtgctct
tcaatcagggataatcgctatagggatcagaaactgaggctcctgagatgtggacttaat
aagctgatataccttgtggaaggtgacccaaatttttctgaagcctctgaaagcatcaaa
acagcttgttttacgacagagatcttggaaggatttgatgttcagagaactagtggttta
gctgatacactgaggaagtatggatatcttacgcaatcaataactcaattttataaatta
gagctacctgatgaccagcttaagtgcgctgggatctgtcctactttcaatgaatttatc
aaaagatgccaagacctggataaaatgacagtcagtgatgtatttgccactcagcttatg
caggtaatgactgttcttgtaagaagggtagactcatgcctattctattgcagtgttaaa
acttatgaagttgaattaaccatttgttatggccctcttatttaa
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