Pistacia vera (pistachio): 116143689
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Entry
116143689 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC116143689
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116143689
03036 Chromosome and associated proteins [BR:
pvy03036
]
116143689
Spliceosome [BR:
pvy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116143689
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
116143689
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPR_2
PPR_1
PPR
HAT_PRP39_N
HAT_PRP39_C
PPR_3
HAT_Syf1_CNRKL1_N
Suf
RRM_1
TPR_24
HAT_Syf1_CNRKL1_C
PPR_long
MSC6_N
HAT_Syf1_M
UTP6_C
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
116143689
NCBI-ProteinID:
XP_031284989
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MQFVSLWFDYLRFMKRIYPSVCEFSPDGIAKARNLFERAITAAGLHVEGSKIWEAYKEFE
QVILHTIDEINNKASLSIFHRQLSVPLANLRSILLAYKLEVEXGTALDIESGDLDGIPST
IYLKFEQSSGDPARVPFLYERAITEFPVSSDLWLGYTRYLDKTLKLGNIVRDVHSRARKN
CPXVGDLWVRSLLALERCRASEKEISIEIFEKSLLCTFSTIEEYLNLFLTRVDGLRQRIL
LPRVEEDALNFSSIRETFQVRIFSSFQRASDYLSQQMKNTDGLLHLYAYXAHLELNLGKD
QVGAWGFWESLVWRSGSTLEAWQGYIAMEIELGHLNEARSIYKRCYSKKFSGTGSEDICH
NWLRFEREYGTLEDFDHTAQKVTPRLEELHLFRLQQEAKSVPELIDQKEKSHKKSVNGKR
KTDSNMTNEQSSAKRSEKFFSDVGGVEFVRILQDKFTGKSRGLAYVDFADDTHLTTAVGK
NNEMFVGKKISTARLNPKQKRKDSTGHGASREHDSLSGIRFYLSQSSNQTFKESRTPHCA
SNKHSDNIQLKGRNTFAMPRNVRPLDEPSTNPKSKEVEDEKLKSNNEFREMFLKATVKNA
RNLVAEMQLNDAFLNSWTYSIFIDGLCKYGCVFEALEMFIALLNNKISVIIEGLNSLIDG
LCKTERLGTEFSIDKGNLSGSHRYTVHFSLFIKIVLLDVKNLKLLKTFVDALFMGASDYL
SQQMKNTDGLLHLYAYWARLELNLAVALGAWEGLQAGLVEKARQLLLEHKIQRGVVLDIY
TYNILINGRIGDTRELFESITRKGYRPNVVYYTTLINWYCKNKEVNEALSLHREMILEGI
RPNVITYNTLLTGFFRIAMTYSIFVDGLCKNGCVLEALEMFNALVNNKIAVSIEGLNSLI
DGLCKTERLGTKFSIDKGNLSVSPFQRTSDYLSYQMKNTSGLLHLYDYWARLELNLAAAL
AI
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgtctcactttggtttgactacttgagatttatgaaaagaatatatccatct
gtatgtgaattttcacctgatggtattgcgaaggcaagaaatctcttcgagcgtgctata
actgctgctggtttgcatgttgaaggcagtaaaatatgggaagcatacaaggaatttgag
caagtcattctccataccatagatgagatcaacaataaggcatcactaagtatatttcac
cgtcagttgtctgttccccttgctaacttaaggtcaattcttcttgcctacaagttggag
gtggaanctgggactgctctagatattgaatcaggtgatttagatgggattccttctact
atctacttgaagtttgaacagtcttctggagatccagcccgtgttccatttctctatgaa
cgtgctattaccgagtttcctgtatcaagtgatctctggcttggctatactcgctatttg
gataaaaccttgaagctaggaaatattgtacgagatgttcattccagggctaggaaaaat
tgtccttaggttggtgatctttgggttcgatctttgcttgctttggaacgttgccgtgca
tctgagaaagagatatctattgaaatctttgagaagtcccttctatgcactttttcgacc
attgaggagtacctaaacttattcctcactcgagtggatggtttgagacaaagaatcctt
ttgcctagagtagaagaggatgcattgaatttttcatcgataagggaaacgtttcaggtt
cgcatattttcttcctttcaacgggcatctgattacttatctcaacaaatgaagaataca
gatggtttgttgcatttgtacgcttatnaggctcatttggagctaaatttgggaaaagat
caagttggagcttggggcttttgggagagcctggtttggcgcagcgggtcaacgttggaa
gcctggcaaggttatatagctatggaaattgaattgggacatttaaatgaagctaggtcc
atctacaagagatgctacagtaaaaagtttagtgggacaggttcagaggacatatgccac
aactggttgcgttttgagagggaatacgggacacttgaagattttgaccacacagcacag
aaggttacacctcgcttggaagagctgcatttatttaggttacagcaggaagccaaatct
gttcctgaactaatagatcagaaagagaagtcacataagaaaagtgttaatggaaagaga
aaaacagattcgaacatgactaacgaacagtcttcagctaagcgatctgaaaaattcttt
agcgatgttggtggggttgaatttgttcgaattttgcaggacaagttcaccggaaagtca
aggggcctggcatatgtggattttgccgatgatacacaccttactacagctgtaggaaag
aacaatgaaatgtttgttgggaagaagataagcactgcaagattaaatccgaagcaaaag
agaaaagattctactggtcatggggcctctagagaacatgatagtctaagtggaattagg
ttttatctttcgcaaagtagtaatcagactttcaaggagtctagaacgccacattgtgct
tctaataaacatagtgataacattcagctgaaggggaggaacacatttgcaatgccaagg
aatgtcagaccacttgatgagccctcgacaaatccaaaatccaaggaagtggaagatgag
aagttgaagtcaaataatgagttcagagaaatgttccttaaagctacggtgaaaaatgca
cggaatttagttgctgagatgcaacttaacgatgcttttcttaattcttggacatatagc
attttcattgatgggctttgcaagtacggatgtgtttttgaagcattggaaatgtttatt
gctctactaaataataagatttcagttatcattgaaggtttgaattccctcattgatgga
ttatgtaaaacagagagattaggaactgaattttccattgataagggaaacctttcaggt
tcgcataggtatactgttcatttttccttgtttattaaaattgttttactcgatgtcaag
aacttgaagcttcttaagacatttgtcgatgctctattcatgggcgcatcagattactta
tctcaacagatgaagaatacagatggtttgctgcatttgtatgcttattgggctcgtttg
gagctaaatttagctgtagctctaggtgcttgggagggcctgcaggctggattggttgag
aaggctagacaactattgttggaacataagattcagcgaggtgtagttcttgacatttat
acttacaacattttaataaacggtagaattggtgatacaagggagttgtttgagtctata
actagaaaagggtataggcctaatgttgtttactacactactttaatcaactggtattgc
aagaataaagaagttaatgaagctcttagtcttcatcgagagatgattttagaaggaatt
aggcctaatgtgattacatataacaccttgttaactggcttttttcgtatagctatgaca
tatagcattttcgttgatgggctttgcaagaacggatgtgttttggaagcattggaaatg
tttaatgctctagtaaataataagattgcagttagcattgaaggtttgaattccctcatt
gatggattatgtaaaacagagagattaggaactaaattttccattgataagggaaacctt
tcagtttctccttttcagcgcacatcagattacttatcttatcagatgaagaatacatct
ggtttgctgcatttgtatgattattgggctcgtttggagctaaatttggctgcagctctg
gctatttga
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