Pistacia vera (pistachio): 116143800
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Entry
116143800 CDS
T07386
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116143800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116143800
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116143800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
116143800
NCBI-ProteinID:
XP_031285122
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
MAAKPGAASTTYSPIDPTNKTRPSIFTGSDVDWLRPDSRAFQQCRPAFFRTGAVNSAAGS
AYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFAAPVRGQGSDHKEFSSMLH
KALEGVIIVETFPKTTVDVFALVLESGGSDLPVVVSCASLALADAGIMMYDLVASVSVSC
LGKNLLIDPVLEEESYQDGSLMIACMPSRYEVTQLTVTGEWSTSKFNEAMQLCLDASAKL
GEIMRSCLKEAASATQE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaacctggtgcagcttcaaccacttactctccgattgacccgaccaataaa
acccgaccatctattttcactggctctgatgtcgactggctacgacccgactctcgtgcc
tttcagcagtgtagacccgcttttttccggactggtgctgtgaattctgcagctggatct
gcttatgcagaatttggaaataccaaggtgattgtgtcagtatttgggccaagggaaagt
aagaaagcaatgatgtacagtgatataggtcggttaaattgtaatgtcagctatacaact
tttgctgcaccagttcgtggacagggatcagaccacaaagaattttcatctatgcttcat
aaagctttggagggtgtaataatagtggaaactttccctaagacaacagttgatgttttt
gcattggtgttggaatctggaggcagtgatctccctgttgtggtatcatgtgctagtctt
gcccttgcagatgctggtattatgatgtatgaccttgttgcctcagtttctgtgtcatgc
ctagggaaaaatcttctgattgatcctgttttggaggaggaaagctaccaagatggaagc
ctaatgattgcttgcatgccttctcgttatgaagtgacacaattaaccgttactggggaa
tggtcaacatcaaagttcaacgaggcaatgcagctttgtcttgatgcatctgctaagctt
ggggaaatcatgaggtcatgcttgaaagaagctgcttctgctacacaagaatag
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