Pistacia vera (pistachio): 116143972
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Entry
116143972 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03015
mRNA surveillance pathway
pvy04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116143972
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116143972
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvy01009
]
116143972
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116143972
03036 Chromosome and associated proteins [BR:
pvy03036
]
116143972
Protein phosphatases and associated proteins [BR:
pvy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
116143972
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
116143972
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
116143972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WDR55
DSE1_N
Me-amine-dh_H
ComGF
Motif
Other DBs
NCBI-GeneID:
116143972
NCBI-ProteinID:
XP_031285281
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MNNGGVSEGLSPPLEWKFSQVFGERTAGEEVQEVDIISAIEFDGTGDHLATGDRGGRVVL
FERTDTRDHGGNRKDLEMMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWC
QSANSALYLLSTNDKTIKLWKVQEKKVKKVCDLNVYPDKASGNGPMVGSSTSAVPKPYIA
NGGYRERPFGSSGNDFLFPPGGVSSLHLPVVVVVKFAIXVTNQETSLVAGCRRIYAHAHD
YHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPVNMEDLTEVITSAEFHPT
HCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEEQEAPGSRSFFTEIIASISDIKFAKDG
KHILSRDYMTLKLWDITMDSGPVATFPVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRV
ATGSYSNLFRVFGCSEGSTETATLEASKNPMRKQVQTPSRPTRPLASLSGVVRRVKGVDN
SGVDASGNAYDFNMKLLHLAWHPSENSIACAASNSLYMYYA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacggtggcgtttcagaaggcttgtctccgccgcttgagtggaaattttctcag
gtttttggggaacggactgcaggagaggaagtacaggaagttgatatcatatccgctatt
gagtttgatggaactggtgaccatcttgctactggagatcgtgggggccgagtggtttta
tttgaaagaactgacacacgggatcatggtgggaatcggaaggatctagagatgatggat
tattcaatcagtagacatcctgagttccggtataaaacagagttccaaagccatgaacct
gagtttgactatctaaaaagtttggaaattgaggagaaaatcaacaaaattagatggtgc
cagtcagccaacagtgccctgtatcttctgtctactaatgacaagaccattaaattatgg
aaggtccaagaaaagaaagtcaagaaagtatgtgatttgaatgtataccctgacaaagct
tcaggaaatggtccaatggtaggttcaagtacatcagcagtccccaaaccttatattgca
aatggtggatacagagagagaccctttggtagttcgggcaatgactttttatttccacct
gggggtgtttcatctctgcacctgcctgtggtagttgttgttaaatttgctatttaggtt
accaatcaggagacaagccttgtggctggatgtcgaagaatatatgcccatgcccatgac
tatcatattaactctatttcaaataacagtgatggtgaaacttttatatcagccgatgac
ctgcgaataaatctctggaacttggaaattagcaaccaaagttttaatattgtagatgtg
aaacctgtgaacatggaagatctaactgaggtgataacttctgcggagtttcatcccacc
cattgtaatatgttagcgtatagtagttcaaagggttcaattcgtcttattgatatgcga
cagtcagctttatgtgatactcatagcaaattgtttgaggaacaggaagctcctggttca
agatcttttttcacggagataatagcctcaatctcagatattaagtttgctaaggatgga
aaacatatactaagtcgtgactatatgactcttaagttgtgggatataactatggattct
ggtcctgttgcgactttcccggttcatgaatatctaagacctaagctctgtgatttatat
gaaaatgactctatcttcgacaaattcgagtgttgtctaagcggagatggacttcgagtg
gctactggttcctacagcaacctgtttcgtgtgtttggttgttctgaaggcagcacagaa
acagcaactttggaagccagcaaaaatcccatgaggaaacaagttcaaactccatcaagg
cctactagacctctggcttctctttctggtgttgtcaggagggtaaaaggtgtggataac
tctggagttgatgcaagtggaaatgcttatgatttcaacatgaagttgctacacttagct
tggcatccatctgaaaactcaattgcctgtgccgcttcgaacagcctttacatgtattat
gcataa
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