Pistacia vera (pistachio): 116144088
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Entry
116144088 CDS
T07386
Name
(RefSeq) DDB1- and CUL4-associated factor 4 isoform X1
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvy04121
]
116144088
Ubiquitin system [BR:
pvy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116144088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_DCAF4
WD40
WD40_CDC20-Fz
WDR55
WD40_Prp19
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML_2
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_WDHD1_1st
Gryzun-like
Beta-prop_TEP1_2nd
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
116144088
NCBI-ProteinID:
XP_031285402
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MPQDLPGFYYDAEKNRYFPIKGPIPGTSRPRIPSASSQNPLSNSTQPAKSLRTGERTSKL
LQVRELNGNVLSLTKGKRKFKEEFQKKLVSQPVVLKYQGTRHRADAALQPIHVKLNTSTG
QREIDAVLAGSINGTLSLFGVGKVGQHFDTGINFLPDRVGPRVKENKAESYKEAEHIWIP
EGASILMSSRVSSIKLPRKYSSCELDDGFNCRRTVVTTLGSGTPGGAIYVLSLDDPFEFP
PGLFSIRQRMTSVASFNCTIWTADCNSSASEAVVGTNRGAAMVNLETGSTSWVCCGKSDV
FAQQLNESGKVILCGLRNGAIVTVDVRERPQGSARRLIRHRIPYSPLRKTVQNSNKQWFE
LSGNICPSRTAFMPSSITSLVSLRFYDQYFLASAMDGSVMLYDHRLSKRGPIQSYEGHAN
SHTLLQLAVDQSERFVMAGGEDCNLRIWSIKSGELLFQEKVSDSAPSTVSWRLVERPLGN
PDEKQSQNELQFAESLRWEAWFGSVDGLYHMGWP
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagaccttcctgggttctattatgatgccgagaagaaccggtacttccccatc
aaaggtcccattcccggcacttctcgtcctcgaattccttctgcttcatctcagaaccca
ctttcaaactctacccagccagccaagtcacttcggactggtgaaagaacttcgaaattg
cttcaggtcagggagttgaatggtaatgttctgtctctcactaaagggaagcgtaagttt
aaggaggaatttcaaaagaaactagtttcacaacctgtggttctcaagtatcaaggaaca
agacatagagctgatgctgctttacagccgatacatgttaaattaaacacatctacgggt
caaagggaaattgacgctgtattagcaggcagtataaatggcactttgagtttgtttgga
gttggaaaagttggacaacattttgatactggaataaatttccttccagatcgtgtgggg
cctcgtgttaaagaaaacaaagcagaaagttataaagaagctgagcatatttggatacct
gaaggagcttcaatactaatgtcatctcgtgtatcttctataaaattgcctagaaagtac
tcttcttgtgaactggatgatggttttaactgccggcgtacagtggtaactactttggga
tcggggacacctggtggagctatatatgttcttagtcttgatgatccatttgaatttccc
cctgggcttttttccattaggcagaggatgacttcagttgcttctttcaattgtaccata
tggactgcagattgcaactctagtgcgagcgaagcagttgttggaaccaatcgtggtgct
gctatggtcaatttggaaacagggtcaacatcatgggtgtgctgtggtaaaagtgatgtt
tttgcacaacaacttaatgagtcgggcaaggtcattttatgcggacttagaaatggagca
attgtgacagttgatgttcgtgagagaccacaagggtctgctagaagacttattagacac
cggataccttactcacctttgagaaaaactgttcaaaattctaataaacaatggtttgag
ctgagtggaaacatttgtccttcacgcactgcttttatgccttcgtctattaccagtttg
gtatcattacgtttctacgatcaatacttcttggcaagtgcaatggatggatcggttatg
ctttatgatcatcgcctaagtaagagagggcccatacaatcatatgaagggcatgctaat
tctcacactctgttacagcttgcagtagaccaatctgagagatttgttatggcaggtgga
gaggactgcaacttacgtatttggagtatcaaatctggagaactgctctttcaagaaaag
gtttctgattcagccccatctactgtgagctggcgactagtcgaaaggcctcttggaaat
ccagacgaaaagcaaagccaaaatgagcttcagtttgcggagagccttagatgggaagct
tggtttggatcagtggatggactgtaccacatgggttggccttga
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