Pistacia vera (pistachio): 116144325
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Entry
116144325 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116144325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvy03009
]
116144325
Ribosome biogenesis [BR:
pvy03009
]
Eukaryotic type
Pre-60S particles
GTPases
116144325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
GTP_EFTU_D2
EF-G_D2
EFG_III
EFG_IV
SRPRB
DUF5601
Motif
Other DBs
NCBI-GeneID:
116144325
NCBI-ProteinID:
XP_031285648
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MGESDTRNLRNICILAHVDHGKTTLADHLIAATGGGFLHPKLAGKLRFMDYLDEEQRRAI
TMKSSSIALHYKHYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGFHIQTHAVLR
QSWIEKLMPCLVLNKIDRLICELRLSPMEAYNRLLRIVHEVNGIMSDKVDSILAGPSEKL
CDENLEFIEDDEEDTFQPQKGNVAFVYALDGXGFTISEFAEFYATKLGASTAALQKALWG
PWYFNPKTKMIVEKKGIGTGSKVRPMFAQFVLEPLWQVYQAALEPDGDKAVLEKVIKSFN
LSIPPRELQSKDPKTVLQSVMSHWLPLSDAVLSMVVKCVPDPVSAQSFRISRLLPNREIL
DYDVDKNVLTEADLVRKSVXACDSSPEAPCVAFVSKMFAVPIKMLPQRGSNAKILDNYSE
KGXNGESDECFLAFARIFSGVLYSGQRVFVLSALYDPLKGESVQKHIQEAELQSLYLMMG
QGLKLVASAKAGNVVAIRGLGQHILKSATLSSARNCWPFSSMVYQVSPTLKVAIEPTDPA
DMGALMRGLWLLNRADPFVEVTVSSRGENVLAVAGEVHLERCIKDLKERFAKVSLEVSPP
LVSYKETIEGEGEGESCNPLENLKLLSGSSDYVEKMTPNGRCVVRVQVNKLPLNVTKVLD
ECADLLGGIIGRQSIKCLETQRSSIDEEDNPIEAFKQHIMDALENHISSGNEIDKERVEK
YKAKXQKFLTRIWAIGPRHVGPNILFTPDYKRKNTDCSVLIRGSAHVSERLGFVDNANDI
NNDADSAAGTLLEVTQASSLCQEAQSLQSSIVSGFQLATAAGPLCDEPMWGLAFVVEAYI
SPLAGQADEPESLQQSEQYGIFSGQVMTAVKDACRAAMLQKKPXLVKAMYFCELNTPTEY
LGPMYAVLARRRARVLKEEMQKGSPLFTVHAYLPXSESFGFPDELRRWTSGAASALLVLS
HWEALPEDPFFVSKTEEEIEEFGDGSSVLPNTARXLIDAVRRRKGLPVEEKVVQHATKQR
TLGRNV
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagtctgatacccgaaacctccgaaacatatgcatattagcacatgtagaccat
ggtaaaacaacacttgctgaccatctaattgccgccactggtggtggttttctccaccca
aaactagcgggtaaacttaggtttatggattatcttgatgaggaacaaaggcgtgccatt
acaatgaagagctcttccattgctcttcattataaacactattcaattaacttgattgac
tcccctggtcatatggacttctgtagtgaagtctcgaccgctgcccgtttgagtgatggt
gccttggttttggttgatgctgttgagggttttcacattcagactcacgctgtcttgcgt
cagtcttggattgagaagttgatgccatgtttagtgcttaataagattgataggttgatt
tgtgagttgaggttgagtccaatggaagcttataataggctgttgagaattgttcatgag
gttaatgggattatgagtgacaaagtggattctatactcgcggggccttccgagaagctg
tgtgatgagaatcttgagtttatagaggatgatgaggaagatacatttcaaccccagaag
gggaatgtagcatttgtttatgcattggatggatgaggttttacaattagtgagtttgct
gaattttatgctacaaagcttggagctagtaccgctgcattgcagaaggctttgtggggt
ccttggtatttcaatccaaagacgaagatgattgtggagaagaaggggataggtacaggg
agtaaagtgcggcctatgtttgcacagtttgtgcttgagccattgtggcaagtttaccag
gctgctttagagccagatggggataaagcagtacttgagaaagtgattaaatcgtttaat
ttgtctataccacctcgtgagcttcagagcaaggatccaaaaactgtgcttcaatcagtt
atgagccattggcttccattgtcagatgcagtcttgtcaatggtagtgaagtgtgtgcca
gatccagtttctgctcaatcttttcgtatttcacgtttgcttccaaatagagagatttta
gattatgatgttgataaaaatgtacttacggaggcagatcttgtgaggaagtcagtttag
gcctgtgattcaagccctgaagcgccatgtgttgcttttgtttccaagatgtttgctgtc
ccaataaaaatgctgcctcaacgaggttcaaatgcgaagattttggataattattctgag
aaaggctgaaatggtgaatcagatgagtgcttccttgcatttgctaggatctttagtgga
gttctttattcagggcaaagggtttttgtgctttcagctttatatgatccattaaagggg
gaatcagtgcagaagcatatacaagaagcggagttgcagtccttatatctaatgatgggt
caaggcttgaaactagtggcttctgccaaggcagggaatgttgtggctatccgaggcctt
ggtcagcatatattgaagagcgcaactctttcgtctgcaagaaactgttggcctttctca
agtatggtatatcaggtctcaccaactttaaaagttgcaattgagccaactgatccagca
gatatgggtgctttaatgagaggattgtggcttttgaatcgtgcagatccatttgtagag
gttactgtttcatctagaggggaaaatgtgcttgctgttgcaggagaggttcatctagaa
agatgcataaaggatttgaaggagaggtttgctaaggtaagcttggaagtctctccacct
cttgtgtcctataaagagaccattgagggtgagggtgagggtgaatcatgtaatccatta
gagaatctgaaattattaagtgggagctctgattatgttgagaagatgactccaaatggc
agatgtgttgttagagtgcaagtcaacaaacttcctcttaatgtgactaaggtgcttgat
gagtgtgctgatttgcttggtggtattattggaaggcaaagcatcaaatgcttggaaacc
cagagatcaagcattgatgaggaagataatccaattgaagctttcaaacagcacataatg
gatgcattggagaatcatatttcctctgggaatgagattgacaaggagcgagtggagaaa
tataaagcaaagtgacaaaagtttcttacaaggatttgggcaattggtccaaggcatgtt
ggtcctaacatcctcttcacaccagattataaaagaaagaatactgattgctctgttctt
ataagaggttctgctcatgtgtctgagagattaggctttgtggataatgctaatgatatc
aataatgatgctgattcagctgctgggacattgttggaagttactcaagcttcatcattg
tgccaagaagcacagagtcttcagagcagcatagtttctggatttcagctggctactgca
gctggccccttatgtgatgaaccaatgtggggattggcatttgttgttgaggcttacatc
tctcccttggcagggcaagctgatgagcctgaatctttacaacaatctgagcagtatggc
atcttctctgggcaggttatgacagctgttaaagatgcctgtagagcagctatgttgcag
aagaaacccnggcttgttaaggccatgtatttttgtgagttgaacaccccaactgaatat
ttgggtcctatgtatgctgtgcttgctcgaaggcgagccagagtcttgaaggaggaaatg
cagaaagggtctccgcttttcactgttcatgcttatttgccgntctctgaaagttttggt
ttccctgatgagcttaggagatggacttcaggagctgcaagtgcccttcttgtccttagt
cattgggaagcacttccagaggatcctttctttgtgtccaaaacagaagaggaaattgaa
gagtttggagatggttctagtgtgctgcccaatacagcaagataactcattgatgctgtg
aggcgacggaagggcctccctgtggaagaaaaagtagtgcagcatgcaacaaagcagagg
accttgggtcgtaatgtttag
DBGET
integrated database retrieval system
