Pistacia vera (pistachio): 116144978
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Entry
116144978 CDS
T07386
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116144978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116144978
03009 Ribosome biogenesis [BR:
pvy03009
]
116144978
04131 Membrane trafficking [BR:
pvy04131
]
116144978
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvy04147
]
116144978
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116144978
Ribosome biogenesis [BR:
pvy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116144978
Membrane trafficking [BR:
pvy04131
]
SNARE
SNARE associated proteins
Others
116144978
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116144978
Exosome [BR:
pvy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116144978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
CDC48_2
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Vps4_C
Viral_helicase1
AAA_7
NACHT
NB-ARC
AAA_24
TsaE
Zeta_toxin
DUF815
Zot
Motif
Other DBs
NCBI-GeneID:
116144978
NCBI-ProteinID:
XP_031286297
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MTHPAESSNASSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCEQPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGNLFDAFLKPYFLESYRPVRKGDFFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDEVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNCSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRRRDN
PEAMDEDVEDEVPEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFSE
AGTGATTGSDPFSTSAGGADDDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgactcatccggctgaatcctctaacgcgagttcggggaagaaggacttctccacggcg
attttggagaggaaaaaatcgcctaatcggctggtcgttgacgaggcggttaacgatgac
aactccgtcgtcgctttgcatcctgataccatggaaaagctccagcttttccgcggcgac
accattctcatcaaaggaaagaaacgaaaagatacaatctgcattgctcttgctgacgat
acatgtgaacagcctaaaatcaggatgaacaaggttgttagatccaatcttagggttcga
cttggggatgttgtctctgtgcaccagtgcccagatgttaagtatggcaagcgtgttcac
attcttcctattgatgataccattgaaggagttactgggaatctgtttgacgctttcttg
aaaccttatttcttggagtcttatcgccctgtgaggaaaggagatttcttccttgttaga
ggtggaatgaggagtgttgaattcaaggtcattgaaactgatcctggggaatactgtgtt
gttgctccagacactgaaattttctgtgagggggaacctgtgaagagggaagatgaggat
aggttggatgaagtcggttatgatgacgttggtggtgttcgaaagcagatggctcagatt
cgtgagttagtggagcttccattaaggcatcctcagctctttaaatcaattggtgtgaag
ccaccaaaggggatcttactttatggacccccaggttctggaaagactttgatagccaga
gctgtcgctaatgaaactggtgctttcttcttttgtattaatgggccagaaattatgtcc
aaattggctggagagagtgaaagtaatctcaggaaggcatttgaagaagcggagaagaat
gctccatctataatctttattgatgagattgattccattgctcccaagcgagagaagaca
aatggtgaagttgaaagacgtattgtttcacagcttttaactcttatggatgggcttaaa
tcccgagcccatgttattgttatgggggctactaatcgcccaaatagtattgaccctgct
ttgaggaggtttggtagatttgatagggagatagacattggtgttccagatgaagttggg
cgccttgaagttctccgcatccatacgaagaacatgaagctgtctgatgaagttgatcta
gagaggattgctaaagatactcatgggtatgtcggtgctgaccttgctgctctgtgtacc
gaagctgcattgcaatgcatcagagagaaaatggacgtgattgatttggaggatgaaact
attgatgcagagatacttaattctatggctgttacaaatgagcacttccaaactgcactt
ggaactagcaacccttctgctttgcgtgaaactgttgttgaagttcccaattgcagctgg
gaggacattggaggccttgaaaatgttaagcgtgagcttcaagagactgttcaatatcct
gtggagcatccagagaagtttgagaaatttggcatgtcaccctcaaaaggtgtccttttc
tatggtcccccggggtgtgggaaaactctacttgcaaaggcaattgcaaatgaatgccaa
gcaaatttcatcagcattaaaggccctgaactgctcactatgtggtttggtgagagtgaa
gccaatgttcgggaaatatttgacaaggctcgacaatctgcaccatgtgttcttttcttc
gatgagcttgactctattgcaactcagaggggaagcagtgtcggggatgccggtggtgct
gctgatcgagttttgaatcaactccttactgaaatggatggcatgtcagctaagaagaca
gttttcattattggggccacaaatagacctgacatcattgacccagcacttttgcgtcca
ggtcgtcttgaccagttaatttatattcctctaccagatgaggattcacgccatcagatc
ttcaaagcctgtttgagaaagtcaccagtctcaaaagatgttgatattagagcattagca
aagtatactcagggcttcagtggggcagatattactgagatatgccagcgagcttgcaag
tatgccattagagagaacatagagaaggatattgagaaggagagaagaagaagggacaat
cctgaagctatggatgaggatgtcgaggacgaagtgccagagattaaggctgctcatttt
gaagagtccatgaagtttgctcgcaggagtgtcagtgatgctgatatccgcaaatatcag
gcatttgctcaaaccttgcagcagtctaggggtttcggaagtgaattccggttttctgag
gctggaacaggggctactactggatctgatccattctccacttctgctggtggggcggat
gacgatgatttgtatagttag
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integrated database retrieval system
