Pistacia vera (pistachio): 116145136
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Entry
116145136 CDS
T07386
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvy04121
]
116145136
Ubiquitin system [BR:
pvy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116145136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_DCAF12
MIOS_WD40
WD40_RFWD3
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
NBCH_WD40
Beta-prop_Vps41
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
116145136
NCBI-ProteinID:
XP_031286429
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
METSRSQSFFQDIRCRELNGFKVTKRPYFGGVVSDFAEIGAVAVEHSGEETPPLAISFCK
TSRNSHIYAVSDEDGYVSLFDSRRKFSSFACHQENAEKARICDWVAHQNAIFDLRWIKED
KNILTASGDQTIKLWDAQEKKCIGVLMGHTGSIKSLCSHPTNSDIVVSGSRDGSFALWDL
RCNTSSKRSGEFCLASSAVVKGAHLSSQAKRVRRGKAASMSITSVLYLKDEVTIATAGAV
NSVVKFWDTRNLKSQVTQACPYPESSGLKEKRLHGISSLSQDLNGVFLAASCKDNRIYLY
NVLQLDKGPIQSFSGCQIGSFYVKAAISPDAAHILSGSSDGTAYVWQVNKPQLDPVMLKS
HDGEVTAVDWCPFETGKMATSSDDFTVRLWNIQNKSCLSKRSPSSIRRRVMAIPGAECRK
LLMTDELAYSMKGPDSSYSSDEAVHQSSSSNPITMPIVGTPDAQKRKFSSSDLKETFEKT
PEANLKSPSSVLNPPSSVKRRTIRDYFIVSP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggagacctctagatctcaatcgtttttccaagatatcagatgcagagagctcaacgga
tttaaagttacaaagagaccatattttggtggcgttgtgtcagatttcgcggaaatcgga
gctgtggccgttgaacacagcggcgaggagacacctccgttggcgatttcattttgcaag
acaagtagaaactctcatatatatgcagtgtctgatgaggatggttatgtgagcttgttt
gattctcgaaggaaattttcttcatttgcatgtcatcaagagaatgcagagaaagccaga
atttgcgactgggttgcacatcaaaatgcaatttttgatttacgctggatcaaggaagat
aaaaacattctgacagcttcaggtgatcaaacgataaagttatgggatgcacaggaaaag
aaatgtattggagtgttgatggggcacacagggagcataaaatctttgtgctctcatcca
acaaattctgatattgtcgtgtctggttcaagagatgggtcctttgctctatgggacttg
agatgcaacactagttccaaaagaagtggggaattttgcttagcctcatctgccgtggta
aaaggagctcatctttcatctcaagcaaaaagggttaggcgtggcaaggctgcttccatg
agcattacatcagttctttatctgaaagatgaggtgaccattgctactgctggtgcagtg
aacagtgttgtaaaattctgggatacaagaaatcttaaatctcaagttactcaggcatgt
ccttatcccgagtcatcaggtttaaaggaaaaaagattacatggtatatctagcctttct
caggacttgaacggagtgttccttgcagcttcatgcaaggacaacagaatatacttgtac
aacgtacttcagcttgataagggtcctatacaatctttttctggatgtcaaataggatca
ttctatgttaaggcggcaattagtcctgatgcagcacatattctcagtggctctagtgat
ggaactgcatacgtatggcaggtgaataaacctcaattagatcctgtcatgttgaaaagt
catgatggagaagttacagccgtagattggtgcccatttgagactgggaagatggcaact
tcttcagatgacttcacagttcggttatggaacatccagaacaaatcttgcttgagcaaa
cgatctccatcttccatccgaaggagagtaatggcaattccgggtgcagaatgtaggaaa
cttttgatgactgatgaattggcatattcaatgaagggtcctgatagttcatattcttca
gatgaagcagtacaccaaagtagttcttccaatcctatcaccatgcctatagttggtact
cctgatgctcagaagagaaagttctcatcctctgatttgaaagaaacctttgagaaaacc
cctgaagctaatttgaagagtccatcttctgtgttgaaccctccttcctctgtgaaacga
agaactatccgagattactttatcgtatcgccgtag
DBGET
integrated database retrieval system