Pistacia vera (pistachio): 116145335
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Entry
116145335 CDS
T07386
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04120
Ubiquitin mediated proteolysis
pvy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116145335
04120 Ubiquitin mediated proteolysis
116145335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvy04121
]
116145335
Enzymes [BR:
pvy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116145335
Ubiquitin system [BR:
pvy04121
]
Ubiquitin ligases (E3)
U-box type E3
116145335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
116145335
NCBI-ProteinID:
XP_031286642
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MSTQKPQRSPEEIEDIILRKIFLVRLTDAADSNADSRIVYLELTAAEILSEGKDLKLTRD
LMERILIDRLSGSFPGAEPAFTYLINSYRRAHEEGKKIANMKDKNVRSELESVIRQSKKL
LVSYCRIHLANPDCFGGSEEKKSNKFDASNVSPLLPLIFSEVGGGIEGFGVSSSGGSGAQ
CPPGFLKEFFEEADWDSLDPILKGLYENLRGSVLNVSALGNFQQPLRALLYLISFPVGAK
SLVNHPWWIPKSSYTNGRVIEMTSILGPFFHVSALPDPTFFKSQPDVGQQCFSDASTRRP
ADLLSSFTTIKTVMKGLYKDLGDVVLALLKNTETREHVLQYLGEVINKNSSRAHIQVEPM
YCASSGMFVNLSAVMLQLSDPFLDANLTKRDKIDPKYVFYSSRLDLKELTALHASSEEVA
QWINKDSPGKIDVSGQYSDGENRLLRSQEAASSSSFASEPSLQNVKPTSSVGAGKSKYPF
ICECFFMTARVLNLGLLKAFSDFKHLVQDISRAEDTLATLKAMQGQTPTPQLELDIKRIE
KEIELYSQEKLCYEAQILRDPDLIQHALSFYRLMVVWLVDLVGGFKMPLPSTCPMEFACM
PEHFVEDAMELLIFASRIPKVLDGVLLDDFMNFIIMFMGSPNFIRNPYLRAKMVEVLNCW
MPRRSGSSSATATLFEGHQMSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLE
YLWQVPSHRNAWMQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILEIKEIEAEMSNTT
EWERRPAQERQERTRQFHSQENIIRIDMKLANEDVSMLAFTSEQIVAPFLLPEMIERVAS
MLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVHIYVHLARGDEQNIFPAAISSDG
RSYNEQLFGAAADVLRRIGEDGRVIREFVELGAKAKAAASEAMDAEATLGEIPDEFLDPI
QYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLITDEELKARIEEFVR
SQELKRHGERLNIQSIKDSIQTTNGEMLID
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgcaaaaaccgcagagatcaccggaagaaatcgaggatataatcctccgcaaa
atcttcctcgtccgattgaccgacgccgctgactccaacgccgattcgcgaatcgtgtac
ctcgaattgactgccgccgaaatcctcagcgaaggtaaagacctaaagcttactcgtgat
ttgatggagaggattcttatcgaccggctttccggtagcttccccggtgccgagccggcg
tttacttatttgatcaactcgtatcgtcgcgctcatgaggaaggtaaaaagatagcgaat
atgaaggataagaatgtacggagtgaattggaatcggtgattaggcaatcgaagaagctt
ttagtttcttattgtagaattcatttagcgaatccagattgtttcggtggcagtgaagag
aagaagagtaataaattcgatgcttcaaatgtttcgccgttgttgccgttgatattttcg
gaggtcggaggaggaatagaagggtttggagtaagcagtagtggtggtagtggggctcag
tgtccgccgggatttttgaaggaattttttgaggaagctgattgggatagtttggacccg
attttgaaagggttgtatgagaatttgaggggaagtgtgttgaatgtttcggcattgggg
aattttcagcagccattaagggcattgttgtatttgattagttttccggttggagctaag
agtttggtgaatcatccgtggtggattcccaagagttcttatacgaatgggagagttatc
gagatgacgagtattttgggtcccttttttcatgtcagcgcgttgcctgatcctactttt
ttcaagagccaacctgatgttggccagcagtgtttctctgatgcgtcaactcgtcgacca
gctgatttgttatcgtctttcaccacaataaagacggtaatgaaaggtttatataaggat
cttggagatgttgttctcgctctcctgaaaaatacagagacacgggagcatgttcttcaa
tatcttggagaggttataaataaaaattcttccagggcccatattcaggttgaacctatg
tattgtgcaagttctggcatgtttgtcaaccttagtgctgtcatgcttcagctgagtgat
ccatttttagatgcaaatttaactaaaagggataaaattgatcccaaatatgttttctac
agtagtcgtttggatctgaaagagttgactgctcttcatgcatcatcagaggaagttgct
caatggattaataaagatagtcctgggaaaatagatgtctctggacaatatagtgatggt
gagaatcgattgctacgatctcaagaagccgccagttccagcagctttgcgtctgaacct
tctcttcagaatgtgaagccaacatcaagtgttggtgcaggaaaatctaaatacccattt
atctgtgaatgtttctttatgactgcaagggtgctcaacttgggcctgctaaaagcattt
tctgactttaagcatctagttcaggacatttcaagagctgaagatacacttgccacttta
aaagccatgcaagggcagacacctactccacaattggagctggatataaaacgaattgag
aaagaaattgaattgtactcacaggagaagctttgttacgaggctcagattttaagggat
ccggatcttattcagcatgcgctctctttctatcgattaatggtggtttggttggttgac
ctggttggtgggtttaaaatgcctttgccatcaacttgcccaatggaatttgcttgtatg
cctgagcattttgtggaagatgcaatggaattgcttatttttgcctcacggattccaaaa
gtgttggatggggtcttgctggatgattttatgaacttcattattatgttcatgggaagt
ccaaattttattaggaacccttatctcagagctaagatggttgaagttctgaattgctgg
atgccgcgtagaagtggctcatcatctgccacagctactctatttgaagggcatcaaatg
tctcttgagtaccttgtgaggaatctgttgaagctatatgttgacatcgagttcacgggt
tctcacacacagttctatgataagttcaacatccgccacaatatagctgaactccttgag
tacctatggcaagtccctagtcaccgtaatgcttggatgcagattgcaaaggaagaggaa
aagggtgtttatctgaatttcttgaacttcctcatcaacgatagcatttatcttcttgat
gaaagtcttaacaaaattttggaaatcaaagagattgaagctgagatgtcaaacacaaca
gaatgggagcgaagaccagctcaagagaggcaggagagaacccgacaattccattcacaa
gaaaatattatacgaattgatatgaaattagccaatgaggatgtgagcatgttggcattc
acttcggagcagattgtagctcctttcctacttcctgagatgattgaaagagtggccagt
atgctcaattattttttgttacaacttgtgggcccccagagaaaatctcttactcttaaa
gaccctgaaaagtatgaattccgtccaaagcagttgctgaagcagattgtccacatttat
gttcatctggctaggggtgatgagcaaaacatttttccagctgctatctccagtgatggt
cgatcatacaatgagcagttgtttggtgctgcagctgatgtgcttcggagaattggtgaa
gatgggagggttattcgggagtttgttgagcttggtgcaaaagctaaagctgctgcttcc
gaggctatggatgcagaagctacccttggagagatacctgatgaattcttagatccaatt
caatacactttgatgaaggatccagtgatcttaccttcttcgaggatcacagtggacagg
ccagttattcaaaggcatcttcttagcgatagtacggatccattcaatcgctcccatctt
acggcagacatgttgataacagacgaagaattgaaggcaagaattgaggagtttgtgaga
tcccaagaattaaaacggcatggagaacgcttaaacattcagagcataaaggactcaata
cagacaacaaatggtgagatgttgattgattag
DBGET
integrated database retrieval system
