Pistacia vera (pistachio): 116145746
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Entry
116145746 CDS
T07386
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvy03036
]
116145746
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pvy00535
]
116145746
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116145746
Meiosis-specific proteins
Cohesin complex and associated proteins
116145746
Proteoglycans [BR:
pvy00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
116145746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
Phage_lysis
Motif
Other DBs
NCBI-GeneID:
116145746
NCBI-ProteinID:
XP_031287053
LinkDB
All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MHIKQVIIEGFKSYREQIATEPFSPKINCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHSLLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRQQIIQVVNYLDERLRELDEEKEELRKYQQLDKQRKSLEYSIYDKELNDARQKLV
EVEEARTKRSEISTKMYNSVLDAHEKSKDEEKKLKEIMKEVQALNKEKETVEKRQTEALK
RQTALELDVKDLDERISGNSQAKVDAEEQLLLLQKEIEDSLKELEKIKPEYEEQGIKEKE
ITKGIMEREKQLSILYQKQGRATQFSSKAARDKWLQKEIDDLERVLSSNLVQEKKLQDEI
HRLIADLKERDMYIEKVKSNIETLESHNFHSREIFNNHKTERDKLQDKRKSLWVKESELC
TEIDKLKAEVEKAEKSLDHATPGDVRRGLNSIRRIRNEYEIAGVYGPIIELLDCDEKFFT
AVEVTAGNSLFHVVVDTDETSTKIIRHLNSLRGGRVTFIPLNRVRAPHVNYPRSRDVVSL
LEKLNFSPEFKPAIAQVFARTVICRDLDVCARVARADGLDCITLEGDQVSKKGGMTGGFY
DFRRSKLKFMNIIKRNKKSIDAKEKELEQVRFMLQGVDQQITDLVTEQQRIDAKRGHEKS
ELEQLKQDIANANKQKQIISKALENKEKSLADVRTQIDQLRASVAMKEAEMGTELIDHLT
PEEKDLLSRLNPEITDLKEQLITCRTNRMETETRKAELETNLTTNLKRRKQELQALIASS
ENDMLPSESELKRQELKDAKLFVQEAEQQHKGISDGLDKLTKEVKRIKNEKAKLKTLEDE
YEKKLQDDARELEQLLNKRNILLAKQEEYSKKIRELGPLSSDAFETYTRKSIKELHKMLH
RCNDQLQQFSHVNKKALDQYVNFTEQREELQRRQAELDSGDEKIKELIAVLDQRKDESIE
RTFKGVARHFREVFAELVQGGHGHLVMMKKKDGEDDNDDDGPREVDMEGRVEKYIGVKVK
VSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGNM
IRRLADMANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVAKEDALDFIEHDQSHNT
P
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgcacataaaacaggttataattgaagggtttaagagctacagagaacaaattgctact
gagcccttcagcccaaaaattaattgtgttgttggtgctaatggatctggcaagacaaac
tttttccatgctattcgttttgttttgagcgacctcttccaaaacttgcgtagtgaagat
agacattcattactccatgaaggtgcagggcaccaagttttatctgcatttgtggagatt
gtttttgataattctgacaatcgcatcccggttgataaggaggaagtgcgcttgcgtcga
acaattggtttgaagaaggatgaatatttcttggatggaaagcacatcacgaaaactgag
gttatgaatttattggagagtgctggattttctcgttctaatccgtactatgtagtgcag
caaggaaagatagcttctttgacactgatgaaagattctgagcggctggatttacttaag
gaaattggtggcacccgagtttatgaggagagacgtcgtgaaagtttgaaaattatgcaa
gaaactggcaacaaaagacagcagataattcaagttgtcaactacttggatgagagactc
agggaactggatgaagagaaagaagagctgagaaaataccagcagcttgacaagcagagg
aaatctctagaatacagcatttatgataaggaacttaatgatgctcggcagaaattggtg
gaggttgaagaagctagaaccaagcgttctgaaatatcaactaagatgtataacagtgtg
ctggatgctcatgaaaagtccaaggatgaagaaaagaaattgaaagaaattatgaaagaa
gttcaagcattaaacaaagaaaaagaaacagttgaaaagcgacaaactgaagcactgaag
aggcagacagcgcttgagcttgatgtgaaagacctagacgagaggatttctggaaattcg
caagcaaaagtggatgctgaggaacaacttcttttgctacaaaaagaaattgaggactca
ctgaaggagctcgagaagattaagccagagtacgaggaacaaggcataaaggaaaaagag
ataacaaaaggtatcatggagcgtgaaaagcagcttagcattctttatcaaaaacaaggt
cgtgccacccaattttctagtaaagctgctcgtgataaatggcttcaaaaagaaattgat
gatcttgagcgggttctttcttcaaacttggttcaggagaaaaaacttcaggatgaaatt
catcggcttattgctgacttaaaggagcgggacatgtacattgagaaggtcaaaagcaat
attgagactttagaatctcacaattttcactctcgtgaaattttcaataaccataagacc
gagagggacaagctgcaggataagcggaagtccttatgggtgaaagagagtgaactttgt
acagagattgataagctgaaagctgaagttgagaaggcagagaaaagccttgatcatgct
acccctggggatgtgaggcgagggctgaattctatccgtcggattcgcaatgaatacgaa
attgctggagtttatggtccaattattgagctgcttgattgtgacgaaaaatttttcact
gcagtcgaggttaccgctggaaacagcttatttcacgtggtggttgatactgatgaaaca
tcgaccaaaataattagacaccttaattcattaagaggtggacgtgttacctttatacca
ttaaatcgggtgagggctcctcatgtaaattatccaaggagtcgtgatgtggtatctctt
ctggagaaattgaatttttctcctgaatttaaaccagcaattgcccaggtatttgctcga
acagtgatttgcagagatttagatgtgtgtgctagagttgctcgagctgatggtctggac
tgcataaccttggaaggtgaccaagtaagcaagaaaggtggtatgacaggaggattttat
gattttaggcgctcaaaattgaagtttatgaatataatcaaacggaacaaaaaatctatt
gatgcaaaagaaaaggaactggaacaagttagatttatgcttcaaggagtagaccagcaa
attacagaccttgtaactgaacaacagagaattgatgccaagcggggtcacgaaaaatca
gaattggagcagcttaagcaggatattgcaaatgctaataagcaaaaacaaatcatctct
aaagcccttgaaaataaggaaaaatcacttgctgatgtgcggactcaaattgatcaactt
agagctagtgtggccatgaaagaggctgaaatgggcacagagctcattgatcacttaaca
ccagaggaaaaagatcttctatcacgtctgaaccctgaaataactgatctaaaggagcaa
cttatcacctgcaggacgaatcgcatggagactgaaacaagaaaagcagagcttgagact
aatctaacaactaaccttaagaggcggaagcaagagttgcaagccctcatagcttcttca
gagaatgacatgctgcctagtgaatctgaattaaaaagacaggaattgaaggatgctaaa
ttatttgttcaggaagcagaacagcaacataaagggatctctgacggtttagataaatta
accaaggaagtcaagaggatcaaaaatgaaaaggctaagttgaagactttggaagacgaa
tatgagaagaaacttcaggatgatgcaagagaacttgaacaactattgaataaaagaaat
attcttctagctaagcaagaggagtactcgaagaaaattagggaattgggtccattatca
tctgatgcttttgaaacgtatacgcgaaagagcatcaaagaattacataaaatgcttcat
aggtgcaatgatcaactgcagcagtttagtcatgtaaataagaaagcacttgatcagtat
gtaaatttcacagagcaacgggaagaacttcagagaaggcaagctgaactggattcaggg
gacgagaaaattaaagaacttatagcggttttagatcaaaggaaggatgaatcaatagaa
cgtactttcaaaggtgttgctcgccacttccgagaagtgtttgctgaacttgtgcaaggc
ggtcatggtcatctagttatgatgaaaaaaaaggatggtgaggatgacaatgatgatgat
ggacctcgtgaagtagatatggaaggaagggttgaaaaatacattggtgttaaagtgaag
gtttcgtttactggacaaggggagacacagtcgatgaagcaattgtctggaggtcagaaa
actgttgtggctctgacgcttatttttgccatacagcgatgtgatcctgctcccttctat
ctatttgatgaaatagatgcagcactggatcctcagtacagaactgcagtgggaaatatg
attcgtcgtctagcagacatggcaaatactcaatttataacaacaacatttcggccagag
cttgtgaaagtggctgacaaaatatatggtgtgacacacaaaaacagagtgagccgagtc
aatgttgtcgccaaagaagacgccttagattttattgagcatgatcagtctcacaataca
ccttag
DBGET
integrated database retrieval system
