Pistacia vera (pistachio): 116145957
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Entry
116145957 CDS
T07386
Name
(RefSeq) mRNA-decapping enzyme subunit 2-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116145957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116145957
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
116145957
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116145957
mRNA degradation factors
5'-3' decay
Decapping complex
116145957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
116145957
NCBI-ProteinID:
XP_031287240
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MSSLHRSSSVPYKNGGLPPQELLDDLCSRFVLNVPKEDQQSFERILFLVEYAHWFYEDNS
VENNPSLKSFTLKEFTSLLFNSCDVLRPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYE
RCILVKGWKGSSWSFPRGKKNKDEEDHTCAVREVLEETGFDVSMLLNKDDYIELIFGQQR
VRLYIIAGVRDNTFFAPQTKKEISEIAWHRLDDLQPATEDVISHGITGLKLYMVAPFLAS
LKIWISKHKPPIAPKPDMPLKGICVWKAKSSSIGSNTMILENQLTKPSSDSQPPDTGPGK
SFRNFRFNTAAILQAMEAGFST
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtctccatcgatcctcaagcgtgccgtataaaaacggcggccttcctcctcaa
gaacttctcgacgatctttgcagtcggtttgtgttaaatgtgccaaaggaagaccaacaa
tcatttgagaggattttgttccttgtggagtacgcacattggttctacgaggataattca
gtggaaaataatccatcactgaagtcattcactttgaaggagttcacttcattacttttc
aacagttgtgatgtattaagaccttatgttgctcacatagacgacatattcaaggatttc
acttcttacaaggttcgagttccagtaacaggggcaatcattttggatgaaacctatgaa
cggtgcatactagtgaagggatggaaagggtcaagctggagttttccacgtggaaaaaaa
aacaaagatgaagaagatcatacatgtgccgtccgagaagtcctggaggaaacaggtttt
gatgtttcaatgcttcttaacaaagatgactacattgaactgatatttggacagcagagg
gtgcggctctatataattgctggtgtcagagataatactttctttgcccctcaaacaaaa
aaggagatcagtgaaattgcatggcatcggcttgatgatcttcagccagctactgaagat
gtgatatcccatgggatcactggtctgaagctttacatggtggctccttttttggcatct
ttgaaaatatggatttcaaagcataagccccctattgctccaaaacctgatatgcctctc
aaagggatctgtgtgtggaaagccaagagcagttctatagggagtaacacaatgattctg
gagaatcaattaacaaaaccttcatctgattctcagcctccggacactggcccgggcaaa
agcttcaggaactttagattcaatactgctgctatcttgcaagcaatggaagctggtttc
tcaacttaa
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