Pistacia vera (pistachio): 116145975
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Entry
116145975 CDS
T07386
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvy03000
]
116145975
03036 Chromosome and associated proteins [BR:
pvy03036
]
116145975
Transcription factors [BR:
pvy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
116145975
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
116145975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
CDC45
Motif
Other DBs
NCBI-GeneID:
116145975
NCBI-ProteinID:
XP_031287257
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MTDGHLFNNISLGGRGGTNPGQLKIYSGGIAWKKQGGGKAVELDKADIVGVTWMKVPRTN
QLGVRSKDGLYYKFTGFRDQDVASLTNFFQSNCDLTPEEKQLSVSGRNWGEVDLNGNMLT
FMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENHPPAQVFRDKIMSMADVGAGGEEAVVTFESIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVIVTLDPPIRKGQTLYPHIVLQFETDYVVQSELSLS
EDLLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKVTKPGKFRSAQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGDIKTADGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE
EDEDFVLDKDDEGSPTDDSGEEDSDASDSGGEKEKPVKKESKKEPSSLKASSSKKKSRDA
DEDSSKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGDKWKKM
TAEEKEPYEAKARADKKRYKDEVSGYKNPKAMDIDSGKDSDDE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggtcacctcttcaataacatctctctcggcggccgaggcggcactaatcct
ggccagcttaaaatttattccggggggattgcatggaagaagcagggtggtggtaaagca
gtggaacttgacaaagctgatattgtaggggttacatggatgaaagtccccaggacgaat
cagcttggtgttcgaagcaaagatgggttgtattataaattcaccggatttcgtgaccag
gatgttgctagtttgaccaattttttccagagtaattgcgatttaacaccagaagagaag
cagctttctgtcagtggccgtaattggggagaagttgatttaaatgggaatatgctgact
tttatggttggtcaaaagcaagcttttgaggtatctctagcagatgtatcacaaacacaa
cttcaaggaaaaaatgatgttatcctggagttccatgtcgatgatacaactggagctaat
gagaaagattcattgatggagataagttttcacatccctaattccaacacccaatttgtt
ggtgatgagaatcatccaccagctcaagtatttcgtgataaaatcatgtcaatggctgat
gtcggagccggaggtgaagaagctgttgttacgtttgagagtattgctatcctcacacca
aggggtcggtatagtgttgaacttcatctttcattcttgcggctacaaggacaggctaat
gactttaaaattcagtacagcagtgttgtccgcctctttttacttccaaagtctaaccag
cctcatacctttgttattgttactcttgatccaccaattcgtaaaggtcaaacgttgtac
ccacatatcgttttgcagtttgaaactgattatgtggttcaaagtgagttgtcgttgagt
gaagatcttttgaacacaaagtataaggacaaattagaaccatcatataagggactaatt
catgaggtgttcactacgatattgcgtggtttatctggtgccaaagttactaaaccggga
aaattccgtagtgctcaagatggttatgcggtgaagtcatcattgaaagctgaagatggt
gtattgtatcccctggagaagagcttcttttttctacccaaaccacctacccttatcctt
catgaggagattgactatgtggagtttgagaggcatgctgctggtggctcaaatatgcat
tactttgatcttcttatcaggcttaaaaccgaacaagaacatttgtttcgcaacattcag
agaaatgaatatcataatctctttgactttatcagtgggaagggcttgaaaattatgaac
ctcggagatattaaaactgcagatggtgtggctgctgtccttcaggaggatgatgatgat
gcagttgatccacatcttgagagaattaggaatgaagctggtggtgatgagagtgacgaa
gaggatgaagactttgttcttgataaggatgatgaaggctctccaactgatgattctggg
gaggaggattccgatgctagtgatagtggaggagagaaagagaagcctgtcaaaaaggaa
tccaaaaaagagccatcatcattgaaggcatccagttcaaagaagaaatccagagatgca
gatgaagacagttcaaagaagaaaaagcagaaaaagaaaaaggatccaaatgcgccaaag
agggcaatgtctggtttcattttcttctcgcaaatggaaagggagaatataaagaaaagt
aatccaggaattgcttttactgatgttggaagagttcttggagataaatggaagaagatg
acagcggaggagaaagaaccctatgaagcgaaagctcgtgctgataaaaaacgttataag
gatgaagtcagtggttacaagaaccccaaagcaatggatattgattcaggcaaggactcc
gatgatgaatag
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