Pistacia vera (pistachio): 116146450
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Entry
116146450 CDS
T07386
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116146450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116146450
03009 Ribosome biogenesis [BR:
pvy03009
]
116146450
04131 Membrane trafficking [BR:
pvy04131
]
116146450
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvy04147
]
116146450
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116146450
Ribosome biogenesis [BR:
pvy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116146450
Membrane trafficking [BR:
pvy04131
]
SNARE
SNARE associated proteins
Others
116146450
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116146450
Exosome [BR:
pvy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116146450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
AAA_2
AAA_5
AAA_22
CDC48_2
NPHP3_N
AAA_14
TIP49
RNA_helicase
AAA_28
nSTAND3
Mg_chelatase
ATPase_2
AAA_17
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
AAA_7
Viral_helicase1
NACHT
Vps4_C
NB-ARC
TsaE
DUF815
ResIII
AAA_24
Zeta_toxin
AAA_lid_PRS2_C
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
116146450
NCBI-ProteinID:
XP_031287701
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MADPSAQPSSSSNPKSDKKDFSTAILERKKSPNRLVVDEAVNDDNSVISMHPTTMEKLQF
FRGDTVLIKGKKRKDTVCIVLADEQCEEPKVRMNKVVRSNLRVRLGDVVSVHQCPDVKYG
RRVHILPIDDTIEGVTGNLFDAYLKPYFLESYRPVRKGDFFLVRGGMRSVEFKVIEADPG
EYCVVAPDTEIFCEGEPIKREDEERLNEIGYDDVGGVRKQMAQIRELVELPLRHPQLFKS
IGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE
AEKNAPAIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRVHVIVMGATNRPNS
IDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTRNMKLAEDVDLERVARDTHGYVGADLA
ALCTESALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFLTALGISNPSALRETVVEVP
NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA
NECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGD
AGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEAS
RLQIFKACLRKSPVSRDVDLVALARYTHGFSGADITEICQRACKYAIRENIEKDIERERR
KSENPEAMEEDDIDDVPEIKAAHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGIGSEF
RFPDRTANAATGASDTFSTVTAAADDDDLYN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctagtgcccaaccatcttcttcttcaaacccgaaaagtgataagaaagat
ttttccaccgcaatcctggagcgcaagaagtctcccaaccgtcttgttgttgatgaagct
gtcaatgatgacaattctgtgatttccatgcaccctacgaccatggaaaagcttcagttt
tttcgaggagacactgttttgattaagggaaagaaaagaaaagacactgtttgcattgtt
cttgctgatgaacaatgtgaagaaccaaaagtgagaatgaacaaagttgtacgttctaat
cttagagttcgccttggagatgtcgtatctgttcatcagtgccctgatgtgaaatatggg
agacgggttcatatccttcccattgatgatacaattgagggtgtaactggcaacttattt
gatgcatatttaaagccatacttcttggaatcttaccggcctgtgagaaagggtgacttt
ttcctggtcaggggcggaatgcgaagtgttgagtttaaagtaattgaggcggaccctggg
gagtactgtgttgttgcaccagatactgaaatcttctgtgaaggggaacccatcaaacgt
gaggatgaggagaggttaaatgaaataggctatgatgatgtcggcggtgttaggaagcaa
atggctcaaattcgtgagcttgtagaacttcctctcagacaccctcagctcttcaaatca
attggtgtgaaacccccaaagggaatcttgctttacgggccacctggttctggaaaaacc
ttgattgcaagagctgttgctaatgagacaggtgctttcttctttttgattaatggacct
gaaataatgtcaaagttggctggtgagagtgaaagcaacttgaggaaggcatttgaagaa
gcagaaaagaatgccccagcgatcatatttattgatgaattagattccatagctccaaag
agggaaaagacacatggtgaagtggagaggcgtatagtgtcccagcttctaactctaatg
gatggccttaagtcccgggttcatgtgattgttatgggagccacaaataggccaaatagc
attgatcctgctttgaggagatttgggagatttgatcgagagattgacataggtgttcct
gatgaagttggaagattggaagttctccgaatccacacaagaaacatgaagcttgctgaa
gatgttgatcttgaaagagttgcaagagatacccatggttatgtgggagcagatcttgct
gctctctgtactgaatcggcccttcagtgtatccgggagaaaatggatgtcattgactta
gaggatgagacaattgatgctgaggtgttgaattcaatggctgtaactaacgaacacttc
ctaactgcattggggatctcaaacccatcagccttgcgtgaaactgttgtggaggttcct
aatgtctcatgggaggatattggtgggttggaaaatgttaagagagagcttcaagagact
gtacaatatccagtggagcatcctgagaaatttgagaaatttggcatgtcaccttctaag
ggtgttctcttctatggacctcctggctgtggtaaaacccttcttgcaaaagctattgcc
aatgagtgtcaggctaacttcataagtgtcaaaggacctgagttgctaacaatgtggttt
ggagaaagtgaagcaaatgtacgggagatttttgacaaagcgcggcagtcagctccatgt
gtactattctttgatgaactcgattctattgctacgcagcgtggaagttctgttggagat
gctggtggtgctgctgatagagtcttgaatcaactactgactgaaatggatgggatgaca
gcgaaaaaaacagttttcatcataggtgctaccaacaggccagacattattgacccagca
ttgctcaggcctggacgtctggaccaattaatttatattcctctgccagatgaggcttcc
cgtcttcagatatttaaagcatgtttgcgaaagtcgcctgtctctcgtgatgttgactta
gtagctcttgcacgttatacccatggttttagtggtgcagatattactgaaatatgtcag
cgtgcctgcaaatatgctataagagaaaatattgagaaggatattgagagggagaggagg
aagagtgagaatcctgaggccatggaagaagatgatattgatgatgtccctgagattaaa
gcggcacactttgaggagtcaatgaagtatgcacgccggagtgtcagtgatgcagacatc
cggaagtatcagctctttgcacagactttacagcaatctcgtggaattggatccgagttc
cggtttcccgatcgaacagcgaatgctgccacaggtgcttcagacacattctctacagtt
actgctgctgcagatgatgatgatctttataactga
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