Pistacia vera (pistachio): 116146495
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Entry
116146495 CDS
T07386
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116146495
Spliceosome [BR:
pvy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116146495
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
TGF_beta
Motif
Other DBs
NCBI-GeneID:
116146495
NCBI-ProteinID:
XP_031287773
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MAEPSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAIAALQY
YANVQPSIRGRNVYVQFSSHQELTTMDQNTQGRGDEPNRILLVTIHHMLYPITVEVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQLRQSAVLARTSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNDRSRDFTNPNLPSEQKGRSSQSGYGDAAVPFPQVGTTQFMMANAAAIAAAFGGG
LPPGVTGTNERCTVLVSNLNPDRIDEDKLFNLFSLYGNIIRIKLLRNKPDHALVQMGDGF
QAELAVHFLKGAILFGKRLEVNFSKHPNITQGADTHEYINSNLNRFNRNAAKNYRYCCSP
TKMIHLSTLPQDVTEEEIVSHLEEHGTIVNTKLFEMNGKKQALVMFETEEQATEALVCKH
ASSLGGSIIRISFSQLQSIRENSQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccttcaaaagttgttcacgttcgcaatgtgggccatgagatttctgaaaat
gatttacttcagctgttccagccatttggagtcattactaagcttgtgatgcttcgtgca
aagaatcaggctctcctccaaatgcaagatgttccttcagccatagctgctctccagtat
tacgcaaacgtccaaccatccataaggggaaggaatgtttatgttcagttctcgtcacat
caggagttaacgacgatggatcaaaatactcaaggacgaggggatgagccgaaccgaatt
ctcttagttacaattcatcacatgctttatcctattactgtggaagtgctgcatcaagtt
ttttctcctcatggatttgtggagaagatcgtcacgttccagaagtcagctggttttcaa
gctctaatccagtatcagttacgccaaagtgctgttttagctagaacttctcttcagggt
cgcaatatttatgatggttgctgtcagctagacattcagttctcaaaccttgatgagtta
caagtgaactacaataatgatcggtcaagggacttcacaaatccaaatcttccttcagaa
cagaaaggcagatcctcacaatctgggtatggcgatgcagcagttccatttccacaggtt
ggtactactcagttcatgatggccaatgcggctgcaattgcagctgcctttggcggaggt
ttacctcctggagtaactgggacaaatgagaggtgtacagttttagtgtccaacctaaat
cccgataggatagatgaggataagcttttcaacctgttctccctctacggaaacatcata
agaattaaacttctccgtaataaaccagatcatgcacttgttcagatgggcgatggcttc
caggctgaattggcggtgcactttctgaagggagccatactgtttggaaagcgattggag
gtcaacttctctaagcatccaaacataacacaaggtgctgacacacatgagtacataaac
tcgaatctcaaccgctttaaccgtaatgctgcaaagaactaccgttattgctgctcgccg
acaaagatgatccacctttccactctaccacaagatgtcactgaagaggagattgtgagc
cacctagaggaacatggaaccattgtgaataccaagctctttgagatgaatgggaagaag
caggcactcgtcatgtttgaaactgaggagcaggccactgaagcccttgtgtgcaagcat
gccagctcacttggtgggtctattatccgaatctccttctcccagttacagtcgataaga
gaaaactcacagtaa
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