Pistacia vera (pistachio): 116146654
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Entry
116146654 CDS
T07386
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116146654
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvy01002
]
116146654
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116146654
03036 Chromosome and associated proteins [BR:
pvy03036
]
116146654
Peptidases and inhibitors [BR:
pvy01002
]
Metallo peptidases
Family M1
116146654
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116146654
Coactivators
SAGA/TFTC/STAGA complex
116146654
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116146654
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF2_3rd
TPR_TAF2_C
Peptidase_M1
HEAT_2
Peptidase_M1_N
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
116146654
NCBI-ProteinID:
XP_031287927
LinkDB
All DBs
Position
Unknown
AA seq
1362 aa
AA seq
DB search
MAKPRKPKNEETKAESSGAVVRHQKLCLSIDMDKRQIYGYTELEMVVPDIGIVGLHAENL
GIESVSVDGESTEFEYYPNHQNVENEKRWRMVTSPSSAADAAAAAYVSALDRELVPNLLI
NCCKPFKGLTEQIDHTSLENKLDTSGEAKQNVKLVRIDYWVEKAETGIHFDGNVLHTDNQ
IRRARCWFPCIDDSSQQCCYDLEFTVSHNLIAVSTGSLLYQVLSKDDPPRKTYVYKLDVP
VNARWITLAVAPFEILPDPHHSIVSHLCLPTNLPKLHNTVEFFHNAFSHYEAYLEAKFPF
GSYKQVFLAPEMAVSSSTFGASMSIFSSQVLYDEKVIDQAIDTSIKLAFALARQWFGVYI
TPESPNDEWLLDGLAGFLTDLFIKNFLGNNEVRYRRYKANCAVCKADDSGATTLSSSTSC
KDLYGTHCIGIYGKIRSCKSVAVLEMLEKQMGSNFFRKILQNIVSRAQSATSPVRSLSTK
EFRHFANKVGNLERPFLKEFFPRWVGSCGCPVLRMGFSYNKRKNIVELAVLRECTATPDS
SGPVLNSNLDSENRDSDNGWPGMMSIRVHELDGMYDHPVLPMAGDTWQLLEIQCHSKLAA
RRALKPKKGSKPDGSDDNADAVAALDMRSSMESPLSWIRADPEMEYLAEIHFNQPVQMCI
NQLEKDGDVVAQAQAIAALESLPQLSFSVVNTLNNFLSDSKAFWRVRIEAAFALANTASE
ETDWAGLLHLVKFYKSRRFDANIGLPKPNDFRDFPEYFVLEAIPHAIAMVRAADKKSPRE
AVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILFLSSLLKRVDRLLQFDR
LMPSYNGILTVSCIRTLTQIALKLSGFICLDHVVELIKPFRNPNTIWQVRMEASRALLDL
EFHCKGIDAALSLFVKYIEEEPSLRGQEKLGVHAMRICQAGGGSDFNDEIRTETLVALLH
LLDSRISFNNVFLRHHLFGILQILAGRAPTLYGVPRDKILLRGDGDTYSDQRNICAAFVT
EMKPTEPTLDMPNFSRDNLAISDVSKEVDCVSNGREENILVIPENSKEADIVSNGHERKM
SVPEVSKDADTVSNSHERKMPVVKIRVKQSAATSRAEEADNRAFERSQGGQHEADRVTSS
SVSVDAPQRNSVEAVSISYQNVEEVNSCHDHGSRMTASIGSAKLPSEGDNFGKELQCTAD
SSKVSMHLQPDDPSSPSILQDNNVDPHAKKYVSLQSLSGARQDLNGGSSGKEKEKKKKDK
DKKRKREDPEYLEKKRLKKEKKQKEKEMTKLLSEEVKTPSVEISGKKGEATIKMATVQLQ
QPIEPSQPKATITKVESRAEPSEGSSAPKIRIKLKSKTQNKL
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcgcaagccgaagaacgaagagacgaaggccgagagttcgggcgccgtg
gtccgtcaccagaagctttgcctttccatcgacatggataagcgacaaatctatggctac
accgagttggaaatggtggtaccggatatcgggattgtagggttacatgcggagaatttg
ggaatcgagagtgtgtcagtagatggggagtctactgagtttgaatattatccaaatcat
caaaatgtggagaatgagaagagatggagaatggtgacctcgcctagttcagctgcggat
gctgcggctgcagcatatgtatcagctctggacagagaattggtaccaaatttgctgatc
aattgttgcaagcctttcaagggtttaacagaacagatagaccatacgagtttggagaat
aagttggacacgtctggtgaagcaaagcagaatgtgaaactggttcgtatcgattattgg
gtagagaaagcagaaactgggattcattttgatgggaatgtgttacatactgataaccag
ataaggcgagctcgttgctggttcccttgtatagatgatagctctcaacaatgctgttat
gacctggaatttactgtctcccacaatctcattgctgtcagcactggaagccttctgtat
caggttttgagcaaagatgatcctcctcgcaagacttatgtatataaattggatgttccg
gtcaatgctcggtggataactttggcagttgcaccttttgaaattcttcctgatccccat
catagtatcgtatcacacttgtgtttgccaactaatttgccaaagcttcataacactgtg
gaatttttccacaatgcattcagccattatgaggcatacctcgaggcaaaatttccattt
gggtcatacaagcaagttttcttagctcctgagatggcagtttcctcatctacttttgga
gcttcaatgagtatatttagttctcaggttctgtatgatgagaaagttattgatcaggcc
atagacacaagcattaaacttgcatttgcccttgcgagacagtggtttggagtatatatc
acacctgaatcaccaaatgatgagtggctgcttgatggtcttgctggttttttgacggat
ttgtttataaaaaattttttgggaaataatgaggttcgctatcgaagatacaaggcaaat
tgtgctgtttgcaaagcggatgatagtggtgcaacaactttgagctcttctacttcttgc
aaggatttgtatggaacccattgcattggtatatatggcaaaatacgatcatgcaaatca
gtggcagtccttgagatgttggaaaagcaaatgggatcgaatttcttccgcaaaattttg
cagaatattgtttctcgggctcaaagtgcaacatctcctgtgcgttctcttagtacaaaa
gagtttcgacattttgctaacaaggttggaaatcttgagcgcccgtttcttaaagagttc
tttcctcggtgggtgggatcgtgtgggtgtccggtgttgaggatgggtttttcatataac
aaacggaaaaatattgtcgaactggcggtattgcgggaatgcacagctacacctgattca
agtggtccagttctcaattctaacctggattctgaaaaccgagacagtgataatgggtgg
cctgggatgatgagtattagggttcatgagcttgatggtatgtatgaccatccagttttg
ccaatggctggagacacatggcagctgctggaaatacaatgccattcaaagcttgctgct
agacgagccttgaagcctaaaaagggttcaaaacctgatggctctgatgataatgctgat
gctgtagctgctttagatatgcgctctagtatggaatcccccttgtcatggattagggca
gacccagaaatggaatatcttgctgaaattcattttaaccagcctgtacagatgtgtata
aatcagttagagaaggatggagatgttgttgctcaagctcaagcaattgcagcactagag
tctctaccgcaactttcgttttctgttgttaatactctgaataatttcctcagcgactcc
aaggccttttggagagttcggattgaggcagcatttgcattggccaatacagcatccgag
gaaactgattgggctggtttacttcatttggtgaaattttataaaagtcgaaggtttgat
gcaaatattggacttcccaagccaaatgattttcgtgattttccagagtacttcgttctt
gaggctattccgcatgcaatagctatggtcagagcggcagacaagaaaagcccaagagaa
gctgtagagtttgttttacagcttttgaagtataatgataacaatggaaatccctattct
gacgtgttctggcttgccgcactggtccagtcagttggtgaacttgaatttgggcaacag
agtattctctttctgtcatctcttctcaagcgtgtcgatcggcttttgcagtttgatagg
ctgatgcctagttacaatgggatcttgacagtcagctgcatccgaactttgacccaaatt
gcattaaaactttctggattcatctgtcttgatcatgttgttgaacttattaaaccattt
cggaatccaaatacgatatggcaagttcgaatggaagcaagcagggcactccttgatctt
gagtttcattgtaaaggcatagatgcagcattgtcattgtttgtcaaatatatagaggaa
gagccgtccttgagaggacaggagaaattgggtgttcatgcaatgcgtatatgtcaagct
ggaggtggatctgatttcaatgatgaaattaggaccgaaactctagtagccttgcttcat
ctgcttgacagccgtatttcattcaataatgtctttcttcgtcaccacctatttggcatt
ctacaaatacttgcaggaagagcccctacactctatggcgtgcccagagataaaatattg
cttagaggtgatggtgatacttacagtgaccagaggaacatttgtgcagcttttgtcaca
gaaatgaagcctacggaaccaactctggatatgccaaacttttcacgggataatttggct
atttcagatgtttccaaggaagtagattgtgtttcaaatggtcgtgaggagaatatattg
gttattccagaaaattccaaggaagcagacattgtttccaacggtcatgaacggaagatg
tcagtcccagaagtttccaaagatgcagatactgtttccaacagtcatgaacggaagatg
ccagttgttaaaattagggttaagcaatctgcagctaccagtagagcagaagaggctgac
aatagagcttttgaaagatctcaaggcggacaacatgaagctgatcgtgtaaccagcagt
tcagtttccgtggatgcaccccaaaggaattcagtagaagcagtgagcattagctatcaa
aatgttgaggaggtcaactcatgtcatgatcacggatcccggatgactgctagcattggc
agtgcaaaacttccgagtgaaggtgacaattttgggaaggaactccagtgtactgctgat
tctagcaaagtatccatgcacttgcagcccgatgatccctcatcaccaagcatcctacaa
gataacaatgttgaccctcatgctaaaaaatatgtaagtcttcaaagcctatcgggtgct
agacaagatctgaatggcggttcatcgggtaaagaaaaggagaagaagaagaaagacaag
gataagaaaaggaagcgggaagacccagagtatttggagaagaagcgtctgaagaaggag
aaaaagcaaaaggagaaagagatgacgaaactgcttagcgaagaggtgaaaacgccttca
gtagaaatatctggtaagaaaggggaagctaccattaagatggcaactgtgcaactgcaa
caaccaattgaacccagtcaaccaaaagcaacaattacgaaggtcgaaagcagggcagaa
ccttcagaaggtagctctgccccaaaaatccgaataaaacttaaaagtaagacacaaaac
aaattatag
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