Pistacia vera (pistachio): 116146705
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Entry
116146705 CDS
T07386
Name
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvy03009
]
116146705
Enzymes [BR:
pvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116146705
Ribosome biogenesis [BR:
pvy03009
]
Eukaryotic type
90S particles
Helicases
116146705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
nSTAND3
ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
116146705
NCBI-ProteinID:
XP_031287984
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MAKRKSRSETKQRQGSRNLEGIDSNAMILPANKCNLKHMNEEFEKVKAKENSNLSKAQKR
KLKKLEEEKEKAYMSLKTMENLEKYKISTGLYNLLEASKDMGKVQTRLEKKRNAVQFSKA
GLEDLQNDQGCKRRREGGASCEAEPVLDKPHLGQPIKAYDFGQPLMVNKDVLDDASVSIG
SSQEPSNGGSVAALSCEEVSNNDSRTSMLQDIRNCAPTLSIHDGGRSSKPMTGGLTLGQV
TSDESLNVNIGRTSNLPASLERPPIAPTVVHVSRPNEVENKRKDLPIVMMEQEIMEAVNY
NPTVIICGETGCGKTTQVPQFLYEAGFGSNQCSNRCGIIGVTQPRRVAVLATAKRVAFEL
GLHLGKEVGFQVRHDKKIGDNCSIKFMTDGILLRELKYDVLLRKYSVIILDEAHERSLNT
DILIGMLSRIIQPRQALYEKQQQLLLSGQYLDPKDKIFPLKLILMSATMRVEDFICGGRL
FRDPPVIEIPNRQYPVTIHFSKRTEIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVE
YLCCKLRKASKELIANTSKGNIGDEVTAVSETNTLESINMKEINEAFEIQGNSTEQQTDR
FSSYDEDQFSLHEDESDASYDSETESETEILGEDGNLLVQEPPKDDDNIVDVSGKNWSLA
SLKVAFEALADKNALDSNAERNQTTPTTPEQCSEQFNSGLEKMEVDKGSYGILRVLPLYA
MLPAAAQLRVFEEIKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKKFNSANGMESY
EVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNILPDFSCAEISKVPVDSMVLLMKS
MNIDKVANFPFPTPPEASALVEAERCLKALEALDSNGRLTTLGKAMAHYPMSPRHSRMLL
TLIQIMKAKGCARANLVLGYAAAAAAALSLSNPFVMQLEGSQNNRDDLNLNEGSNILESE
NIIHKREKMRKKKLKEVAKVSREKFSNPTSDALTVSYALQCFELSKSPVEFCNENALHLK
TMEEMSKLRKQLLHLVFNQSGNCGQDFSWTYGTLEDVEHSWRISSSKNILLQNEEELLCR
AICAGWADRVAKRIRPKARSLKEDGKVNAVRYQACMVKEDVFLHRRSSVASSAPEFLVYS
ELLQTKRPYLHGATCVKSDWLVEHARALCSFSRSLRTSKSYYDCQTDQVFYWVIPIFGPH
NWELPLHSLPFSSDDGHRVAVFACALLEGRVLPCLRYVQEFMAASPSTILKPEESGQRRV
GKLLSKLKTRSIDSCAMLKKAWDDDSRALHSEILNWFQKGFHNKFEELWLKMLAEVHLEP
QERFPKKVKEKRKK
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaaagagcaggagcgaaacaaagcaacgacaaggttcacgcaatttggag
ggtattgatagcaatgcaatgattttgccggcaaataaatgtaacttgaagcacatgaat
gaggagtttgaaaaggttaaagcaaaagaaaattcaaacctcagcaaagctcagaaaaga
aagttaaagaagctggaggaggagaaggagaaagcgtacatgtctttgaaaaccatggaa
aacttagagaaatacaagatctcaacaggcttatataatcttttggaggcttccaaagat
atgggtaaggttcaaactaggcttgaaaagaaaaggaatgctgtgcaattttccaaggca
ggtttagaagatctgcaaaacgaccaaggttgcaagagaaggcgtgaaggtggtgcttct
tgtgaagctgaacctgtgttggacaaaccccatcttgggcagcctatcaaagcatatgac
tttgggcaaccattaatggttaacaaagatgtgttggatgatgcctctgtttctataggt
tcttctcaggagccttcaaatggtggatctgttgctgctctatcctgtgaagaagtttca
aacaatgacagcaggacaagtatgctccaagacattagaaattgtgcaccaacgttatct
attcatgatggtggaaggagttctaagccaatgactgggggtttgacgctcggacaggtt
acatcagatgagagcctaaatgtaaacatcggcaggactagcaatcttcctgcttctttg
gagagacctcctatagctccaactgtggtgcatgtatcgagaccaaatgaggttgaaaac
aaaaggaaagatcttccaatagttatgatggagcaggagataatggaagctgtaaattac
aacccaacagttattatatgtggagagacagggtgtggcaagaccacacaagttcctcag
ttcctttatgaagctggttttggttctaaccaatgtagcaatcgatgtggtattattggt
gtgactcaaccacgtcgtgttgctgtccttgccactgcaaagcgagtggcatttgaactc
ggtcttcatctaggcaaagaggttggttttcaagttaggcatgacaagaaaattggtgac
aattgctccatcaagtttatgaccgacggaatattactacgggaacttaagtatgatgtt
ttattaaggaaatactctgtcataattctggatgaagctcacgagaggagcttgaataca
gacatacttattggaatgctttctcgtataattcaacctcgccaggctctatatgagaag
cagcaacagttgttgctttcaggacaatatttagaccctaaagataagatttttccccta
aaacttattctgatgagtgctaccatgcgagtggaagacttcatttgcggaggaaggtta
tttcgtgatcctcctgttatagaaattcctaacagacagtatccagtgactatacatttc
tcaaagagaacagaaattgttgattatataggccaagcctacaaaaaagttatgtcaatt
cacaagaggctgccacaaggtggcatacttgtatttgtcacgggtcaaagggaggtagaa
tatttatgttgtaagttacgtaaagcttcgaaggagctgatagcaaatacttctaaaggg
aatattggtgatgaggtcactgctgtctctgaaacaaacactttggaaagcattaatatg
aaggagatcaatgaagcatttgagattcagggaaactcaactgagcagcagactgacagg
tttagctcttatgatgaagatcagtttagtttgcatgaagatgagtcggatgcttcttat
gattcagaaactgagagcgaaacagaaattcttggtgaggatggaaatttactggtgcag
gaacccccaaaggatgatgataatattgtagatgtatcagggaagaactggagtcttgct
tctcttaaggtggcttttgaagctttggctgacaaaaatgcattagactctaatgctgaa
agaaaccagaccactcctactacaccagaacaatgctctgagcaattcaattctggttta
gagaagatggaagttgataaaggttcctatggtatattgcgtgttctgcctctttatgcc
atgctgcctgctgcagcacagcttcgtgtatttgaagagattaaggaaggagagcggctt
gttgttgttgccaccaatgtggctgaaacatccttaaccattccaggaataaagtatgtg
gttgatactggaagagagaaagtgaagaaattcaactcagcaaatggcatggaatcatat
gaggtacaatggataagtaaggcatcggctgctcaacgtgctggacgagctggaagaact
gggcctggccactgctaccgcctctattcatctgcagttttcagtaacatacttcctgac
ttctcctgtgctgaaatatctaaagtacccgttgacagcatggtccttctaatgaaatcc
atgaatattgataaggttgcgaatttcccgtttccaactcctcctgaggctagtgctttg
gttgaagcagaacgttgtttgaaggctcttgaagctcttgatagcaatggaagactgaca
actttggggaaggccatggctcactacccgatgagtccccgccactcccgcatgctcctt
acacttatccaaattatgaaagcaaaaggttgtgctcgagcaaatctagttctgggatac
gcagcagcggcagcagcagctttgagcttgtcaaatccttttgtcatgcagttggaagga
agtcagaataatagagatgacttgaacctcaatgagggctccaatattctggagagtgaa
aatattattcacaagcgagaaaaaatgaggaaaaagaaactaaaagaagtggctaaagtg
tcccgagaaaaattctccaatcctaccagtgatgctttgactgtatcttatgccttacag
tgttttgaactttctaaaagcccagtggaattctgcaatgaaaatgccttgcacctgaaa
accatggaggaaatgtccaagttgagaaagcaacttcttcatttggtctttaatcaaagt
ggtaattgtggtcaggatttctcatggacttatgggactctggaggatgtagaacactct
tggaggatttcctccagtaagaacatccttttacaaaatgaggaagaactcttatgccga
gctatttgtgctggctgggctgacagagttgccaaacgtattagaccaaaagcaagatca
ttgaaagaagatggaaaagttaatgcagttcggtatcaagcctgtatggttaaagaagat
gtgtttctccatcgtcggtcatctgttgctagttcagctcctgagttcttggtgtacagt
gaattgttacaaacaaaacgaccgtaccttcatggagctacatgtgtgaaatcagattgg
cttgttgagcacgctcgagcattgtgcagtttttcaagatctctcagaacctccaaatct
tattatgattgtcaaacagaccaagtgttttattgggtcattccaatctttgggcctcat
aattgggagctcccattgcatagtttaccatttagtagtgatgacgggcatcgtgtggca
gtatttgcttgtgctttgcttgaaggccgggtcttgccatgcttaagatatgtccaggaa
ttcatggctgcctcacctagtacaattttaaagcctgaggaatctggtcaaagaagggtt
ggaaaacttttaagtaaactaaaaacccggtcaattgacagctgtgcaatgttaaagaag
gcatgggatgatgattctagggctctgcattcagaaattctgaactggtttcagaagggt
ttccacaataaatttgaagagctttggttaaaaatgcttgctgaagtacatttagagcct
caagaacgctttcctaaaaaggtgaaggaaaaaaggaagaagtaa
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