Pectobacterium versatile: OA04_00640
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Entry
OA04_00640 CDS
T07772
Name
(GenBank) ECF family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pvz
Pectobacterium versatile
Pathway
pvz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OA04_00640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvz03021
]
OA04_00640
Transcription machinery [BR:
pvz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OA04_00640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
HTH_28
Sigma70_ECF
PhyR_sigma-like
Rv2175c_wHTH
Fe_dep_repress
HTH_24
HTH_29
HTH_Mga
HTH_10
HTH_31
HTH_7
PAX
Motif
Other DBs
NCBI-ProteinID:
AVT56752
LinkDB
All DBs
Position
74038..74550
Genome browser
AA seq
170 aa
AA seq
DB search
MVRKATASVNDFAQQLYFDHHHWLCNWLRHKLDCAQHAEDLAQDTFLSVLMNPELLTIRQ
PRPFLATVARRLVANHYRRKKIEDAYLDVLSTQPDACMPSPETRLLTLEILEQLDAALDG
LPAPVREAFLLAHLHGMRYSDIAERLRVSSSSVKQYLQRANLQCFFALPL
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaaagcgacggccagcgttaatgactttgcccaacagctctatttcgatcat
caccactggctgtgtaactggctgcgccataaactggactgcgcccagcatgcggaagat
cttgctcaagatacgttccttagcgtgctgatgaacccggaactgctcacgattcgccag
ccgcgcccgtttctggctaccgtggcccgccgtttggtcgccaatcattatcgtcgtaaa
aagattgaagatgcctatctggatgtcttgagcacgcagccggatgcttgtatgccctct
ccggaaacgcgtctgcttaccctcgaaattcttgaacagcttgatgccgcattggatggc
ctgccagcaccggtcagagaagcgtttttgctggcgcacctccacggcatgcgctatagc
gatatcgccgaacgcttacgggtttccagcagttcggtgaaacagtatctgcaacgcgcc
aacctccagtgtttctttgcgctgccgctatga
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