Pectobacterium versatile: OA04_01670
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Entry
OA04_01670 CDS
T07772
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OA04_01670 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvz03400
]
OA04_01670 (mutM)
Enzymes [BR:
pvz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
OA04_01670 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
OA04_01670 (mutM)
DNA repair and recombination proteins [BR:
pvz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OA04_01670 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
AVT56854
LinkDB
All DBs
Position
185120..185929
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGISPYLIGHTILYAEVRNSRLRWPVSAEILSLSDEPVLSVRRRAKYLL
IELTRGWIIVHLGMSGSLRVLPEYSEPEKHDHVDLVMDSGKVLRYTDPRRFGAWLWTDNL
ETCSVLAHLGPEPLEAEFSADYLYQASRGKRTAIKQWIMDNKVVVGVGNIYASESLFAAG
IHPDRAAGSLNENDVAVLVGVIKQVLQLSIEQGGTTLRDFLQSDGKPGYFAQELRVYGRN
GEPCRTCGTPIEIAKHGQRSTFFCRRCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggttgaaaccagccgtcgtgggatttcaccgtatcttatcggc
cacaccattctttatgctgaagtgagaaactcgcgcctgcgctggccggtatcggctgaa
attctctcgctgagcgatgaaccggtgctcagtgtgcgtcggcgggcaaaatatctgctg
attgaactcacgcgcggctggattattgtgcatctcggcatgtctggcagcctgcgggtg
ttgccggaatatagcgagccggagaagcacgaccatgttgatttggtgatggacagcggt
aaggtgctgcgttacaccgatcctcggcgttttggtgcctggctgtggacggataatctg
gaaacctgctcggtattggcgcatctcgggccagaaccgttagaggcggaattctctgcg
gattatctctatcaggcctcacgcggtaaaaggacggcaatcaaacaatggattatggat
aacaaagtcgtcgttggcgtaggcaatatttacgcgagcgaatcgctgtttgcggctgga
atccaccctgacagagcggccggatcgttaaatgaaaacgacgtagccgtattggtgggc
gtgattaaacaggtgctacagctttcgattgagcagggcggtacgacgctgcgcgacttt
ttgcaatcagacggtaaaccgggctatttcgcacaggaactgcgagtctatggccgcaat
ggtgaaccttgtcggacatgcggaacgccgatagaaatcgcgaagcatgggcagcgcagc
acgtttttctgtcgccgctgccagaagtaa
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