Pectobacterium versatile: OA04_01840
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Entry
OA04_01840 CDS
T07772
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz00541
Biosynthesis of various nucleotide sugars
pvz01100
Metabolic pathways
pvz01250
Biosynthesis of nucleotide sugars
Module
pvz_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OA04_01840 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pvz01005
]
OA04_01840 (rfaD)
Enzymes [BR:
pvz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
OA04_01840 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pvz01005
]
Core region
OA04_01840 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
AVT56871
LinkDB
All DBs
Position
complement(202873..203805)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKSLNDIGYRDILVVDNLKDGTKFANLVDLDIADYVDKEDFIASI
VAGDDLGDIDAVFHEGACSSTTEWDGKYMMDNNYQYSKDVLHYCLDRNIPFLYASSAATY
GGRNDNFIEARQYEQPLNVYGYSKFLFDQYVREILPEAESQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINQGENPKLFSGSENFQRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRA
ESFQAVADATLAFHQKGSVEYIEFPEKLKGRYQAYTQADLTNLRAAGYDKPFKTVAEGVA
EYMAWLNRTV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttactggtggtgccggttttatcggcagcaatatcgtaaaatctctgaat
gacatcggctatcgggacattctggttgtcgataacctgaaagacggcaccaagttcgcc
aatctggtcgatctggatatcgcagactacgtggataaagaagatttcatcgccagtatc
gttgctggcgacgatctgggcgatattgatgccgtattccatgaaggtgcttgctcttcc
accaccgagtgggatggcaaatacatgatggataacaactatcagtattctaaagacgtg
ctgcactattgcctcgatcgcaacattccgttcctgtatgcctcgtctgccgcgacctac
ggcggtcgtaacgataactttatcgaagcgcgtcaatacgagcagccgctgaacgtctat
ggctactccaagttcctgttcgatcagtacgtgcgtgaaattctcccagaagctgaatcg
cagatctgcggcttccgctatttcaacgtctacggaccacgcgaaggccacaaaggcagc
atggcgagcgtcgcgttccatctgaacaaccagattaatcagggtgaaaatccgaagctg
ttctccggtagcgagaacttccaacgtgactttatctacgtcggtgatgtcgcagccgtc
aacctgtggttctggcaaaacggtgtttctggcatcttcaactgcggtaccggtcgcgcc
gaatccttccaggctgtcgccgatgccaccctcgccttccatcagaaaggcagcgtggaa
tacatcgagttccctgagaagctgaaaggccgctatcaggcttatacacaagccgatctc
accaatttgcgtgccgcaggctatgacaagccgttcaaaaccgtcgccgaaggcgtggcg
gaatatatggcctggctgaaccgtaccgtttaa
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