Pectobacterium versatile: OA04_03170
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Entry
OA04_03170 CDS
T07772
Symbol
gabD_2
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz00250
Alanine, aspartate and glutamate metabolism
pvz00310
Lysine degradation
pvz00350
Tyrosine metabolism
pvz00650
Butanoate metabolism
pvz00760
Nicotinate and nicotinamide metabolism
pvz01100
Metabolic pathways
pvz01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
OA04_03170 (gabD_2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
OA04_03170 (gabD_2)
00310 Lysine degradation
OA04_03170 (gabD_2)
00350 Tyrosine metabolism
OA04_03170 (gabD_2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
OA04_03170 (gabD_2)
Enzymes [BR:
pvz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
OA04_03170 (gabD_2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
OA04_03170 (gabD_2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
OA04_03170 (gabD_2)
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Motif
Pfam:
Aldedh
DUF1487
Peptidase_Mx
Motif
Other DBs
NCBI-ProteinID:
AVT56986
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Position
345500..346954
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AA seq
484 aa
AA seq
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MSGKNLQNHELFKTGYFAAGKWQQSGATFEVVNPATGESIASVAKAGKKETQAAIDAAYA
AFPAWKRKTAKERSEILYRWYELILENKRYLAELMTAEQGKPVQEAEGEVVYAANFIQWF
AEQGKRANGEIIPPAKPGSKIYATREPVGVVVAITPWNFPLAMLTRKLGPALAAGCTGVI
KPANNTPLSAFALLALAQQAGVPDGVLNGVAGDTQAISDTVMASDKVRKISFTGSTEVGK
TLVRNAADTMKKVSMELGGNAPYIVFDDADIQAAVKGAIANRFRNAGQVCVSANRFYIQD
GVYDEFVSLLAEEVKKLKVGNGMDDGVVLGPLIDDAAVEKVEKHVNDAVEKGGKALVGGK
RHKLGHSFFEPTVIVDANEAMLLAQEETFGPVAPCFRFKTEEEVIQRANNTPFGLAAYFY
SQNLQRVFRVAEALESGMIGINECAVSTELAPFGGVKESGLGREGSVLGLDEFLEVKTWH
LGGL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaaaaatttgcagaatcatgaactgtttaaaaccggctactttgctgcgggg
aaatggcagcagagcggagccaccttcgaggttgtgaatccggcgacgggcgagtcgatt
gccagcgtggcgaaagcgggaaagaaagagacgcaggcggcgattgacgccgcctatgcc
gcctttcctgcctggaagcgtaaaaccgcgaaggaacggtctgaaattctgtatcgctgg
tacgaactgattctggaaaataaacgctatctggcggagttgatgaccgccgagcagggc
aagccagtacaggaagccgaaggtgaagtcgtctatgcggcgaattttattcagtggttt
gctgagcagggaaaacgggctaacggtgagatcattccgcctgcgaaacccggatcgaag
atttacgccacgcgtgaacccgttggggttgttgtcgctattacaccgtggaatttcccg
ctggcgatgctgacgcgtaagctggggccggcgctggctgcgggatgtactggcgtcatc
aaacccgcgaacaatacgccgctgtctgcgtttgcgctgctggcgttggcacagcaggcg
ggtgtgccggatggcgtactcaacggtgtggcgggcgacacgcaggcgattagcgatact
gttatggcgagcgataaagtgcgcaaaatttccttcactggttcgacagaagtagggaaa
acgttggtgcgcaacgccgcagatacgatgaagaaagtgtcgatggagctgggcggcaac
gcaccttatatcgtgtttgatgatgccgatattcaggccgcggtaaaaggcgcgattgcc
aaccgcttccggaatgcgggtcaggtttgcgtcagcgccaaccgattttatattcaggat
ggcgtctacgatgaattcgtctctctgcttgcggaagaagtgaaaaagctgaaggtcggc
aacggtatggatgacggcgtcgtgctcggtccgctgattgacgatgctgccgttgagaag
gtggaaaagcacgtcaatgacgcggtggaaaagggaggcaaggcgcttgtcggtggtaaa
cggcacaagctgggccacagcttctttgagccgacggtgattgttgatgccaacgaagcg
atgctgctggcgcaggaagaaacgtttggtccggttgctccctgtttccgtttcaaaacg
gaagaagaggtgattcagcgcgccaacaatacgccatttggtctggcggcttacttctac
agccagaatttgcagcgtgtgttccgcgtggcagaagcgttggagagcggcatgattggc
attaacgaatgcgcggtttcaaccgagttagcacccttcggcggtgtgaaagagtcagga
ttaggccgcgaaggctctgttttggggctggacgagtttctggaagtgaaaacctggcat
ctgggcgggttgtaa
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