Pectobacterium versatile: OA04_03220
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Entry
OA04_03220 CDS
T07772
Symbol
rapZ
Name
(GenBank) Adaptor protein RapZ for GlmZ/GlmY sRNA degradation
KO
K06958
RNase adapter protein RapZ
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvz03019
]
OA04_03220 (rapZ)
Messenger RNA biogenesis [BR:
pvz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OA04_03220 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_16
AAA_28
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AVT56991
LinkDB
All DBs
Position
complement(350192..351049)
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AA seq
285 aa
AA seq
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MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPELANTLAARNISAAVSIDVRNM
PESPEIFEHAMEQLPPSFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEES
DLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV
FDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSY
LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKPS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatgattgtcagtggtcgctcaggttcagggaaatctgtcgccctgcgcgca
ctggaagatatggggttctactgcgtagataacctgccagtggttctactgccagaactg
gctaatacgcttgcggcacgtaacatttccgcagcagtcagcattgacgtgcgcaatatg
ccggaatccccagagatcttcgagcatgccatggagcaactgccacccagcttctcgcct
caattgctgtttctggatgccgatcgcaatacgctgattcgtcgctacagtgacacccgt
cgccttcacccgctctccagcaagaatctgtcactggaaagcgccattgatgaagaaagc
gacctactggagccgctgcgttcacgtgccgatctgattatcgacacctcagagatgtcg
gtacatgagctggccgaaatgctgcgtacccgactactcggcaagcgagaacgcgaactc
acgatggtgttcgaatcgttcggcttcaagcacggtatccctatcgatgcggattacgtc
tttgacgtgcgcttcctgccgaacccgcactgggatccgaaactgcgcccgatgaccggt
ctggataagcccgttgcgtctttcctcgacagacataccgaagttcacaacttcatctac
cagactcgcagctatctggaactgtggctgccgatgctggaaaccaataaccgcagctac
ctgactgtcgccattggctgtaccggcggtaaacaccgttccgtctacgttgctgaacag
ctggcagactacttccgctcacgcggtaagaacgtgcagtcgcgtcaccgcacgctggaa
aaacgtaaaccctcataa
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