Pectobacterium versatile: OA04_05120
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Entry
OA04_05120 CDS
T07772
Symbol
rhaS
Name
(GenBank) transcriptional activator RhaS
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvz03000
]
OA04_05120 (rhaS)
Transcription factors [BR:
pvz03000
]
Prokaryotic type
Helix-turn-helix
AraC family
OA04_05120 (rhaS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
AVT57172
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All DBs
Position
550234..551073
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AA seq
279 aa
AA seq
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MTLLRGDDFFTSRAVTVAVEPRTPQAAFPEHYHDFWEIVLVEQGAGVHVFNDQPYALCSG
SVFFVRDNDRHLFEDVEGLCLTNMLYRSPRGFRFLSDIAAFLPYGPNGEWQGQWQVNAAG
MQQLKQSMNSLAELAQSDAPEAIAASESLFLHILVQLRQHCFQTQANGPERQGVQALLGW
LQNNYSEEVNWGSLADQFSLPLRTLHRQLKQHTGMTPQRYLNRLRLLEARRRLQQSDDSI
TTIAHACGFSDSNHFSTQFRKAFSQAPKSLRHQAFSREE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacgttacttcgtggtgatgatttttttacttcgcgtgccgtaacggttgcggtggag
ccgcgtaccccacaagcggcgtttcctgaacactatcatgatttctgggaaattgtgctg
gtggagcagggcgctggcgtccatgtgtttaacgatcagccctatgcactgtgcagcggt
tcggtattcttcgttcgtgataacgatcggcatctttttgaagacgtcgaagggctgtgc
ctgaccaacatgctgtaccgctcgccgcgcggattccgcttcctttccgatatcgccgcc
tttttgccgtatggcccgaacggcgaatggcaagggcagtggcaggtcaatgcagcggga
atgcagcagttgaagcagtcgatgaatagtctggctgaactggcgcagagcgatgcaccg
gaagcgatcgcggccagcgagagtttgtttctgcacattctggtgcaactgcggcaacac
tgcttccagacgcaggccaacggccccgaacgtcagggggtacaggcgctgctgggctgg
ttgcaaaacaactacagcgaagaggtcaactggggcagtctggccgatcagttctcgctg
ccgctgcgtacgctgcatcgtcagctcaaacaacacaccggtatgacgccacaacgctat
ctgaatcggttaagattactggaggctcgtcggcggttgcagcagagtgatgattccatc
accactattgcgcacgcctgtggatttagcgacagcaatcacttctcgacgcaattccgc
aaggcattctcgcaggcgcctaaatcactgcgccatcaggcgttttctcgtgaagagtag
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