Pectobacterium versatile: OA04_06810
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Entry
OA04_06810 CDS
T07772
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvz03016
]
OA04_06810 (truB)
Enzymes [BR:
pvz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OA04_06810 (truB)
Transfer RNA biogenesis [BR:
pvz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OA04_06810 (truB)
Prokaryotic type
OA04_06810 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AVT57330
LinkDB
All DBs
Position
733792..734736
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGVSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGNVIEERAIGFSATDLEQALEGFRGTTQ
QVPSMYSALKYQGRKLYEYARQGLTVPREAREITVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPTERMVTLEQLAALAEQAQTQEHPLSLSLDPL
LMPMESPVIDFPEVNLTPVVAGYLKLGQAVQAANAPLNGMVRITEGDEHKFIGMGEIDSD
GRVAPRRLVVEFLV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgccgccgtggccgtgatgtacacggtgtattgttattagataagccg
cagggcgtgtcgtctaatgatgttttgcagaaggtaaaacggatttttaacgctaacaga
gcgggccatacgggggcgttggatccattagcaaccggtatgctgccgatttgtcttggg
gaagcgacgaagttttcccagtatttgctggattctgataagcgctaccgtgtcattgct
cgacttgggcaacggactgacacctctgatgccgatggcaacgtgattgaagagcgtgcg
attggtttttctgctacagatttggagcaggcgctggaaggctttcgtggcaccacgcag
caagtgccgtccatgtactcggcgctgaaataccaagggcgcaagctgtatgagtatgcc
cgtcaagggctgacggttccacgtgaagcacgtgaaatcaccgtttacgaactgcagttc
attcgctgggaaggtgatgaactggagctagagattcactgctcgaaagggacgtacatc
cgtaccatcattgacgatctgggcgaaaagctgggctgtggtgcgcatgtgatttatctg
cgtcgtttgcaggttgctacgtatcctaccgaaagaatggtgacgctggagcagctagcg
gctttggctgagcaggctcaaacacaagaacacccactttcgctgagtctcgatccgctg
ctcatgccgatggaaagcccggttattgattttcccgaagtgaatttgacgccagttgtt
gctggttatttgaagctggggcaagcggttcaggccgcgaatgcgccattgaacggcatg
gtgagaatcaccgaaggtgacgagcacaaatttattgggatgggtgaaatcgacagcgat
ggccgcgttgcgccgcgtcgtttggttgttgagtttctagtgtaa
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integrated database retrieval system
