Pectobacterium versatile: OA04_07460
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Entry
OA04_07460 CDS
T07772
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pvz
Pectobacterium versatile
Pathway
pvz03410
Base excision repair
pvz03430
Mismatch repair
pvz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OA04_07460 (recJ)
03430 Mismatch repair
OA04_07460 (recJ)
03440 Homologous recombination
OA04_07460 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvz03400
]
OA04_07460 (recJ)
DNA repair and recombination proteins [BR:
pvz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
OA04_07460 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OA04_07460 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OA04_07460 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AVT57389
LinkDB
All DBs
Position
796366..798120
Genome browser
AA seq
584 aa
AA seq
DB search
MITQLRRRPLAEDIDLPDTVPPLLRRLYAQRGVKGAQELERSLRGLLKYSLLSGIDKAVD
LLQRALAEKRCIVIVGDFDADGATSTALTVLALRSMGGVNVKYLVPNRFENGYGLSPEVV
AQAAALGAEVIVTVDNGISSHAGVDDAHRRGIAVLVTDHHLPGEILPAADAMINPNLPDC
QFPSKSLAGVGVAFYLMMALFVRLRDSDWFTQPFFTQLGLAKPNLTELLDLVALGTVADV
VPLDANNRILVAQGLNRIRAGECRPGIRALLEVANRDASQLVSSDLGFAIGPRLNAAGRL
DDMTVGVELLLSNDITQARMLANDLDALNQDRREIEQGMQVEALRLCESLERTRTELPYG
LAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGMLKGSGRSISGLHLRDALERLDT
LYPGMMDKFGGHAMAAGLSLHEDRFDDFRQRFGELVGEWLDPSQLEGVVWSDGELALPEL
DLLSTAEMLRYAGPWGQAFPEPTFDGCFRILQPRLLKERHLKAMFEPIGATGAVPLLDGI
AFNVDTTIWPDPSIKEVEMVYRLDINEFRGKRSVQLMIQHLWPR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgattacccaactccgtcggcgtccgctggcggaggacattgatttacctgacaccgtt
ccgcccttgctgcgtcgcctttatgcgcagcgcggcgttaaaggtgcgcaggagctggaa
cgtagcctgcgtggtttactcaagtactcgttgctcagcggcattgataaagcggtcgac
ctgctacaacgggcgctagctgaaaagcgctgcatcgtcatcgttggtgactttgatgcc
gatggtgccaccagcaccgcgcttaccgtattagcgctgcgcagtatgggtggcgtgaac
gtgaaatatctggtgccgaaccgttttgaaaacggctacgggctaagccctgaagtggtg
gcgcaggctgccgcgctgggtgcggaagtgattgtgaccgtggataacgggatctcttct
cacgcgggggttgacgatgcgcatcggcgcggtatcgcggtgctggtgaccgatcaccat
ctgccgggtgaaatcttgcctgctgccgacgctatgattaaccccaatctgcctgactgc
cagtttccctccaaatcattggctggtgtgggcgtcgcgttttacctgatgatggcgctg
ttcgtgcgcctgcgcgatagcgactggtttacgcagcccttttttacacaactggggctg
gcgaagccgaatctcaccgaattactggatctggtcgcgctgggcacggtggctgacgtc
gtgccgctggatgccaataaccgaattctggtcgcgcaggggctgaaccgcattcgtgcg
ggcgagtgtcgcccgggcattcgggcgctgctggaagtggctaaccgcgatgccagccaa
ctggtctccagcgatttaggctttgccatcgggccacgtctcaatgcagctggtcggttg
gatgacatgacggtcggcgttgagctgttattgagtaacgatattactcaggcgcgcatg
ctggctaatgatttagatgcgttgaatcaggacaggcgggagatcgaacaggggatgcag
gtcgaagcgctgcgcctgtgtgaatcgctggaacgcactcgtactgaattgccttacggg
ctggcaatgtatcacccagagtggcatcagggcgttgtcggtattctggcttcgcgtatt
aaagagcgttttcatcgtccggtaattgcctttgcacccgcgggcgatggcatgttgaaa
gggtcggggcgttctatttctggtctgcatctgcgagatgcgctggagcggctggatacg
ctgtaccccggtatgatggataaattcggcggacacgcgatggcggcagggctatcgctg
catgaagatcggttcgacgatttccgtcagcgtttcggcgagctggttggcgaatggctg
gacccatctcagcttgaaggcgttgtttggtctgatggtgaactggctctgccggagctg
gatttgttatcgacggcagaaatgctgcgctacgctgggccgtggggtcaggcattccct
gaaccgacgttcgatggttgcttccgtattctgcaaccccgtctactcaaagaacgccat
ttgaaagcgatgtttgaaccgataggcgcaacaggcgctgtgccgctgttagatggcatc
gcgttcaatgtcgataccaccatctggccggatccgagcattaaagaagtggaaatggtg
tatcggctggatattaacgagtttcgtggtaaacgctcggtgcaattgatgattcaacat
ctgtggccgcgctga
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